Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq1750 172 7e-38
seq1092 105 8e-18
>seq1750
Length=138661
Score = 172 bits (190), Expect = 7e-38
Identities = 464/705 (66%), Gaps = 16/705 (2%)
Strand=Plus/Minus
Query 63018 CCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 63077
|||| ||||| || || | |||||||||| | ||| | ||| | || || || |
Sbjct 35650 CCAGGCCAGGGCACTCGTTGGGACACATCAGGGTCCAGTTCTCGTTCTTCTCGACACGCT 35591
Query 63078 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGT 63137
|||| || | || |||||||| ||||||| || || || | || | ||||| |
Sbjct 35590 TCATGAACATGTCGGGAATCCACAGAGCTAGGAACAGGTCACGGGCGCGGACCTCCTCCT 35531
Query 63138 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 63197
| || |||||| || || |||||| | | | ||| | |||||||| |||| ||
Sbjct 35530 TACCATGATTCTTGCGCAGGTCAAGGAACTCAAACACATCGGCGTGCCACGGCTCCAGGT 35471
Query 63198 ATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 63257
| ||||| | | | ||||| || ||||| || ||||| || | || | || ||||| |
Sbjct 35470 AAATGGCAAAAGCACCAGGGCGCTTGTTGCCGCCCTGGTCGACATAGCGGGCAGTGTTGT 35411
Query 63258 TATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGC 63317
| | || | || ||| || ||||| || ||||| ||||| ||||| || | || ||
Sbjct 35410 TGAACACGCGCAGCATGGGGATAATGCCGTTGGAGGTACCGTTGGTACCAGCAATGTACG 35351
Query 63318 TTCCACTGGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGAT 63375
||| |||| || ||| || |||| | || || || || ||||| || || ||
Sbjct 35350 AGCCAGTGGCGCGGATACGGTGAACATTGA--GGCCGATACCACCAGCCATCTTGGAAAT 35293
Query 63376 TAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAG 63435
| || || || | ||||| || ||||| || || || ||| |||||| ||
Sbjct 35292 CATAGCACAAGTCTTGAGAGTATCGTAAATGCCTTCAATCGAGTCCTCCTTCATGTCAAC 35233
Query 63436 TAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 63495
||||| || |||| ||| || ||| || || || || | || || || ||
Sbjct 35232 CAGAAAGCAAGATGACAGCTGGGCCTGAGGAGTACCAGCGTTGAACAGAGTGGGCGAGGC 35173
Query 63496 GTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT-----AGCTGAGTCTAT- 63549
||||||||| | || || | || |||||||||||||| | || ||| |
Sbjct 35172 GTGAGTAAAGAACTTGCTCGACATGAGGTTGTACGTCTCAATGACGCGGTCGACTCTGTC 35113
Query 63550 ATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGAT 63609
| |||| |||| || || || |||||||| | ||||||||| || | || || ||
Sbjct 35112 ACCCCA--GATG----CCAACAGCCACACGCATAATCATGTGCTGGGGACGCTCGACAAT 35059
Query 63610 CTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 63669
|||| || | |||| || ||| || |||| || || || ||||| || | |||
Sbjct 35058 CTTGCCGTCCAACTTCAGCAGGTACGAACGCTCCAGGGTCTTGAAGCCAAAGTACTGGTA 34999
Query 63670 TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 63714
|||||| || ||||| | ||| | |||| || | ||||||
Sbjct 34998 GTTAAAGTCACGATCGTACACAATGGCAGAGTCCAGCTCATCCTT 34954
>seq1092
Length=189081
Score = 105 bits (116), Expect = 8e-18
Identities = 352/543 (65%), Gaps = 6/543 (1%)
Strand=Plus/Plus
Query 32675 GTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 32734
||| || |||||||| | ||| | ||||||||||| || || |||||||| || ||
Sbjct 137251 GTGCAGGCCCTCGTCGCGGGAAATCAGCTCGTTGGAAAAGGTCAGGCCGGGCATGAGACC 137310
Query 32735 ACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGC 32794
||||| |||||||| ||||| ||||| | || || ||||| || ||||| || ||
Sbjct 137311 GCGCTTGCGCAGCCAAAAGATGGAAGCAAAGGCGCCCGAGAAGAAGATGCCTTCGACGGC 137370
Query 32795 CGCAAAGGCAATAAGTCTCTCTCCATA-ACCG--GCGCTGTCATGTATCCACTTTTGAGC 32851
|||||||| | || | | || | || || ||| |||||||| | ||
Sbjct 137371 GGCAAAGGCCACCAGACGTTGGGCAAAGGTCGACTCGTGGTCGGCAATCCACTTGAGGGC 137430
Query 32852 CCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGttttt 32911
||| |||||||| | || || || || || || || ||||| || ||| |
Sbjct 137431 CCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTATCAATGGCGTTAAACAGGTAGCTGCG 137490
Query 32912 ttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTT 32971
| || || | || || ||||||| || || | || || || |||||
Sbjct 137491 CTGGGCGGGCTCCTTGATGTACGTGTCAATCAGCAGCGAGTATGTCTCGGAGTGGATGTT 137550
Query 32972 TTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACA 33031
|| || || ||||| ||||||||||| | ||||||| ||||| || || |
Sbjct 137551 CTCCATCATGATCTGAAAGCCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCTCGCCCGA 137610
Query 33032 AAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATAC 33091
|| || || | | || || || || || ||||| || ||||| || |||| ||
Sbjct 137611 GAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGACGCGGCAAAGAAGGCCAGCAC 137670
Query 33092 ATGTTTTATAAAATATTTTTCGT-CTGGT--GTTAGTTTATTCCAATCATTGATATCTTT 33148
|| || || || ||||||| || || | | || ||||| || | | || ||
Sbjct 137671 GTGCGAGATGAAGTACTTTTCGTCCTTGTTCATGCGGTTGTTCCAGTCGTGCAGGTCCTT 137730
Query 33149 AGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCA 33208
|| | || | || || | ||||| || || ||||| |||||||| ||||| | |||
Sbjct 137731 GGACAGGTCAATCTCCTCGGCAGTCCAGAAGGACGCCTCGGCCTTTTTGTACATTTGCCA 137790
Query 33209 GAT 33211
|||
Sbjct 137791 GAT 137793
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633613664274000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |