Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq1750 172 7e-38 seq1092 105 8e-18 >seq1750 Length=138661 Score = 172 bits (190), Expect = 7e-38 Identities = 464/705 (66%), Gaps = 16/705 (2%) Strand=Plus/Minus Query 63018 CCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 63077 |||| ||||| || || | |||||||||| | ||| | ||| | || || || | Sbjct 35650 CCAGGCCAGGGCACTCGTTGGGACACATCAGGGTCCAGTTCTCGTTCTTCTCGACACGCT 35591 Query 63078 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGT 63137 |||| || | || |||||||| ||||||| || || || | || | ||||| | Sbjct 35590 TCATGAACATGTCGGGAATCCACAGAGCTAGGAACAGGTCACGGGCGCGGACCTCCTCCT 35531 Query 63138 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 63197 | || |||||| || || |||||| | | | ||| | |||||||| |||| || Sbjct 35530 TACCATGATTCTTGCGCAGGTCAAGGAACTCAAACACATCGGCGTGCCACGGCTCCAGGT 35471 Query 63198 ATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 63257 | ||||| | | | ||||| || ||||| || ||||| || | || | || ||||| | Sbjct 35470 AAATGGCAAAAGCACCAGGGCGCTTGTTGCCGCCCTGGTCGACATAGCGGGCAGTGTTGT 35411 Query 63258 TATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGC 63317 | | || | || ||| || ||||| || ||||| ||||| ||||| || | || || Sbjct 35410 TGAACACGCGCAGCATGGGGATAATGCCGTTGGAGGTACCGTTGGTACCAGCAATGTACG 35351 Query 63318 TTCCACTGGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGAT 63375 ||| |||| || ||| || |||| | || || || || ||||| || || || Sbjct 35350 AGCCAGTGGCGCGGATACGGTGAACATTGA--GGCCGATACCACCAGCCATCTTGGAAAT 35293 Query 63376 TAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAG 63435 | || || || | ||||| || ||||| || || || ||| |||||| || Sbjct 35292 CATAGCACAAGTCTTGAGAGTATCGTAAATGCCTTCAATCGAGTCCTCCTTCATGTCAAC 35233 Query 63436 TAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 63495 ||||| || |||| ||| || ||| || || || || | || || || || Sbjct 35232 CAGAAAGCAAGATGACAGCTGGGCCTGAGGAGTACCAGCGTTGAACAGAGTGGGCGAGGC 35173 Query 63496 GTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT-----AGCTGAGTCTAT- 63549 ||||||||| | || || | || |||||||||||||| | || ||| | Sbjct 35172 GTGAGTAAAGAACTTGCTCGACATGAGGTTGTACGTCTCAATGACGCGGTCGACTCTGTC 35113 Query 63550 ATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGAT 63609 | |||| |||| || || || |||||||| | ||||||||| || | || || || Sbjct 35112 ACCCCA--GATG----CCAACAGCCACACGCATAATCATGTGCTGGGGACGCTCGACAAT 35059 Query 63610 CTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 63669 |||| || | |||| || ||| || |||| || || || ||||| || | ||| Sbjct 35058 CTTGCCGTCCAACTTCAGCAGGTACGAACGCTCCAGGGTCTTGAAGCCAAAGTACTGGTA 34999 Query 63670 TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 63714 |||||| || ||||| | ||| | |||| || | |||||| Sbjct 34998 GTTAAAGTCACGATCGTACACAATGGCAGAGTCCAGCTCATCCTT 34954 >seq1092 Length=189081 Score = 105 bits (116), Expect = 8e-18 Identities = 352/543 (65%), Gaps = 6/543 (1%) Strand=Plus/Plus Query 32675 GTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 32734 ||| || |||||||| | ||| | ||||||||||| || || |||||||| || || Sbjct 137251 GTGCAGGCCCTCGTCGCGGGAAATCAGCTCGTTGGAAAAGGTCAGGCCGGGCATGAGACC 137310 Query 32735 ACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGC 32794 ||||| |||||||| ||||| ||||| | || || ||||| || ||||| || || Sbjct 137311 GCGCTTGCGCAGCCAAAAGATGGAAGCAAAGGCGCCCGAGAAGAAGATGCCTTCGACGGC 137370 Query 32795 CGCAAAGGCAATAAGTCTCTCTCCATA-ACCG--GCGCTGTCATGTATCCACTTTTGAGC 32851 |||||||| | || | | || | || || ||| |||||||| | || Sbjct 137371 GGCAAAGGCCACCAGACGTTGGGCAAAGGTCGACTCGTGGTCGGCAATCCACTTGAGGGC 137430 Query 32852 CCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGttttt 32911 ||| |||||||| | || || || || || || || ||||| || ||| | Sbjct 137431 CCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTATCAATGGCGTTAAACAGGTAGCTGCG 137490 Query 32912 ttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTT 32971 | || || | || || ||||||| || || | || || || ||||| Sbjct 137491 CTGGGCGGGCTCCTTGATGTACGTGTCAATCAGCAGCGAGTATGTCTCGGAGTGGATGTT 137550 Query 32972 TTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACA 33031 || || || ||||| ||||||||||| | ||||||| ||||| || || | Sbjct 137551 CTCCATCATGATCTGAAAGCCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCTCGCCCGA 137610 Query 33032 AAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATAC 33091 || || || | | || || || || || ||||| || ||||| || |||| || Sbjct 137611 GAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGACGCGGCAAAGAAGGCCAGCAC 137670 Query 33092 ATGTTTTATAAAATATTTTTCGT-CTGGT--GTTAGTTTATTCCAATCATTGATATCTTT 33148 || || || || ||||||| || || | | || ||||| || | | || || Sbjct 137671 GTGCGAGATGAAGTACTTTTCGTCCTTGTTCATGCGGTTGTTCCAGTCGTGCAGGTCCTT 137730 Query 33149 AGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCA 33208 || | || | || || | ||||| || || ||||| |||||||| ||||| | ||| Sbjct 137731 GGACAGGTCAATCTCCTCGGCAGTCCAGAAGGACGCCTCGGCCTTTTTGTACATTTGCCA 137790 Query 33209 GAT 33211 ||| Sbjct 137791 GAT 137793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633613664274000