Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq335 91.5 1e-13 >seq335 Length=221524 Score = 91.5 bits (100), Expect = 1e-13 Identities = 147/206 (71%), Gaps = 8/206 (4%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||| ||||| | || || |||| || ||||| || Sbjct 117238 ATGCAGATTTTCGTCAAGACCCTGACGGGTAAGACGATTACCCTCGAGGTTGAGTCCTCG 117179 Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||||||||| || || ||| | || | ||| ||||| || || ||||| || ||| Sbjct 117178 GACACTATCGA--CAATGTCAAGTCCAAGATTCA-GGACAAGGAGGGCATTCCCCCGGAC 117122 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||||| | || || || ||||| || | || |||| |||||| || || ||| Sbjct 117121 CAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCTGACTAC 117062 Query 25176 AATATTCAAAAAG--AATCCACGCTA 25199 || || || || | | ||||||||| Sbjct 117061 AACATCCAGAAGGTCAGTCCACGCTA 117036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433315774056725