Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq335 91.5 1e-13
>seq335
Length=221524
Score = 91.5 bits (100), Expect = 1e-13
Identities = 147/206 (71%), Gaps = 8/206 (4%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| |||| ||||| | || || |||| || ||||| ||
Sbjct 117238 ATGCAGATTTTCGTCAAGACCCTGACGGGTAAGACGATTACCCTCGAGGTTGAGTCCTCG 117179
Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||||||||| || || ||| | || | ||| ||||| || || ||||| || |||
Sbjct 117178 GACACTATCGA--CAATGTCAAGTCCAAGATTCA-GGACAAGGAGGGCATTCCCCCGGAC 117122
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|| ||||| | || || || ||||| || | || |||| |||||| || || |||
Sbjct 117121 CAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCTGACTAC 117062
Query 25176 AATATTCAAAAAG--AATCCACGCTA 25199
|| || || || | | |||||||||
Sbjct 117061 AACATCCAGAAGGTCAGTCCACGCTA 117036
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433315774056725
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |