Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1092 141 1e-28 >seq1092 Length=189081 Score = 141 bits (156), Expect = 1e-28 Identities = 474/728 (65%), Gaps = 15/728 (2%) Strand=Plus/Plus Query 92927 TCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTACA 92986 || || ||||| || |||||||| ||||| || ||||| || || ||| | || Sbjct 137072 TCGGCAACAAACTCAATGTACTGCTTCATCAGGTCGGCGTTCATGCCGAGCAGA-GCGCA 137130 Query 92987 GGT-AGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTAT 93045 || || |||||||||||||| || || || || | || || || | | |||||| | Sbjct 137131 GGGCAGGGCGTCGGTCAAGAACTCCTTTTCAATGGCGACAGCGTCGGTGATGATTTCC-T 137189 Query 93046 TACTCTACTATTTGGTGGTTT--TTGTACGACATAATTGTACATTAAGCACGCAAAGTCG 93103 | || || ||| ||| |||| || | | | | | ||| |||||||| Sbjct 137190 CAATCAGCTTCTTGCTGGGGCGGTTGTT-GAGGTGCGAGAAGAGCAGGCAGGCAAAGTCT 137248 Query 93104 GTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGT 93163 || || | || ||||| || || |||| ||| ||| || || | || || | || Sbjct 137249 GTGTGCAGGCCCTCGTCGCGGGAAATCAGCTCGTTGGAAAAGGTCAGGCCGGGCATGAGA 137308 Query 93164 CCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACG 93223 || || || |||||||| || |||||||| || || || || || ||||| ||| Sbjct 137309 CCGCGCTTGCGCAGCCAAAAGATGGAAGCAAAGGCGCCCGAGAAGAAGATGCCTTCGACG 137368 Query 93224 GCTGCAAATGCCACAATACGTTCGGCAAAATTTG---CGGAATTACTGCTGATCCATTTT 93280 || ||||| ||||| | ||||| |||||| | | || | | || ||||| || Sbjct 137369 GCGGCAAAGGCCACCAGACGTTGGGCAAAGGTCGACTCGTGGT--CGGCA-ATCCACTTG 137425 Query 93281 AAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAA 93340 | ||||| ||||| || || || || | || || || |||||||| ||||| Sbjct 137426 AGGGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTATCAATGGCGTTAAACAGGTAG 137485 Query 93341 TCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGG 93400 |||| | | | || ||||| || || || | ||| || || | || || ||| Sbjct 137486 CTGCGCTGGGCGGGCTCCTTGATGTACGTGTCAATCAGCAGCGAGTATGTCTCGGAGTGG 137545 Query 93401 ACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCT 93460 | |||||||| || || || |||||||| || | || || | |||||| || || Sbjct 137546 ATGTTCTCCATCATGATCTGAAAGCCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCTCG 137605 Query 93461 TGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCC 93520 || || | ||| || || || || ||||| || || || || || ||||| || ||| Sbjct 137606 CCCGAGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGACGCGGCAAAGAAGGCC 137665 Query 93521 AATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATCCCAATCGGATAGA 93577 | | ||| || || | || || || | || | | || | ||| ||| || Sbjct 137666 AGCACGTGCGAGATGAAGTACTTTTCGTCCTTGTTCATGCGGTTGTTCCAGTCGTGCAGG 137725 Query 93578 TCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATA 93637 || || || || || | || ||| ||||||| || || || || || ||||||||||| Sbjct 137726 TCCTTGGACAGGTCAATCTCCTCGGCAGTCCAGAAGGACGCCTCGGCCTTTTTGTACATT 137785 Query 93638 TCCCATAT 93645 | ||| || Sbjct 137786 TGCCAGAT 137793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556844685840600