Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq1092 141 1e-28
>seq1092
Length=189081
Score = 141 bits (156), Expect = 1e-28
Identities = 474/728 (65%), Gaps = 15/728 (2%)
Strand=Plus/Plus
Query 92927 TCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTACA 92986
|| || ||||| || |||||||| ||||| || ||||| || || ||| | ||
Sbjct 137072 TCGGCAACAAACTCAATGTACTGCTTCATCAGGTCGGCGTTCATGCCGAGCAGA-GCGCA 137130
Query 92987 GGT-AGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTAT 93045
|| || |||||||||||||| || || || || | || || || | | |||||| |
Sbjct 137131 GGGCAGGGCGTCGGTCAAGAACTCCTTTTCAATGGCGACAGCGTCGGTGATGATTTCC-T 137189
Query 93046 TACTCTACTATTTGGTGGTTT--TTGTACGACATAATTGTACATTAAGCACGCAAAGTCG 93103
| || || ||| ||| |||| || | | | | | ||| ||||||||
Sbjct 137190 CAATCAGCTTCTTGCTGGGGCGGTTGTT-GAGGTGCGAGAAGAGCAGGCAGGCAAAGTCT 137248
Query 93104 GTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGT 93163
|| || | || ||||| || || |||| ||| ||| || || | || || | ||
Sbjct 137249 GTGTGCAGGCCCTCGTCGCGGGAAATCAGCTCGTTGGAAAAGGTCAGGCCGGGCATGAGA 137308
Query 93164 CCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACG 93223
|| || || |||||||| || |||||||| || || || || || ||||| |||
Sbjct 137309 CCGCGCTTGCGCAGCCAAAAGATGGAAGCAAAGGCGCCCGAGAAGAAGATGCCTTCGACG 137368
Query 93224 GCTGCAAATGCCACAATACGTTCGGCAAAATTTG---CGGAATTACTGCTGATCCATTTT 93280
|| ||||| ||||| | ||||| |||||| | | || | | || ||||| ||
Sbjct 137369 GCGGCAAAGGCCACCAGACGTTGGGCAAAGGTCGACTCGTGGT--CGGCA-ATCCACTTG 137425
Query 93281 AAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAA 93340
| ||||| ||||| || || || || | || || || |||||||| |||||
Sbjct 137426 AGGGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTATCAATGGCGTTAAACAGGTAG 137485
Query 93341 TCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGG 93400
|||| | | | || ||||| || || || | ||| || || | || || |||
Sbjct 137486 CTGCGCTGGGCGGGCTCCTTGATGTACGTGTCAATCAGCAGCGAGTATGTCTCGGAGTGG 137545
Query 93401 ACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCT 93460
| |||||||| || || || |||||||| || | || || | |||||| || ||
Sbjct 137546 ATGTTCTCCATCATGATCTGAAAGCCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCTCG 137605
Query 93461 TGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCC 93520
|| || | ||| || || || || ||||| || || || || || ||||| || |||
Sbjct 137606 CCCGAGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGACGCGGCAAAGAAGGCC 137665
Query 93521 AATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATCCCAATCGGATAGA 93577
| | ||| || || | || || || | || | | || | ||| ||| ||
Sbjct 137666 AGCACGTGCGAGATGAAGTACTTTTCGTCCTTGTTCATGCGGTTGTTCCAGTCGTGCAGG 137725
Query 93578 TCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATA 93637
|| || || || || | || ||| ||||||| || || || || || |||||||||||
Sbjct 137726 TCCTTGGACAGGTCAATCTCCTCGGCAGTCCAGAAGGACGCCTCGGCCTTTTTGTACATT 137785
Query 93638 TCCCATAT 93645
| ||| ||
Sbjct 137786 TGCCAGAT 137793
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556844685840600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |