Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq2283 149 1e-30
seq335 147 4e-30
seq1473 129 1e-24
seq1996 116 7e-21
seq677 102 2e-16
seq907 89.7 9e-13
>seq2283
Length=86879
Score = 149 bits (164), Expect = 1e-30
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || |||||||| | |||| ||| || || ||||| || |||||||| || || ||
Sbjct 41110 CCACCACGAAGGCGGAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGAC 41051
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || ||||| || || | || ||||| || |||
Sbjct 41050 AGGGTACGGCCATCCTCCAGCTGCTTACCCGCGAAAATCAGACGCTGCTGGTCCGGGGGA 40991
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||| | ||||||| || ||||| || | || || |||
Sbjct 40990 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCCGACGACTCGACT 40931
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||||| || || || || ||||||||||| || |||||
Sbjct 40930 TCGAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 40884
Score = 145 bits (160), Expect = 1e-29
Identities = 173/235 (74%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286
|||| | || || || || |||| |||| ||| || |||||||| || |||||||| |
Sbjct 41346 TTTACTGGCCGCCACGCAGACGCAGAACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGT 41287
Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346
| ||||| || || | ||||| || | |||||| || ||||| || || | || ||||
Sbjct 41286 AGTCGGACAGGGTACGGCCATCCTCCAGCTGCTTACCCGCGAAAATCAGGCGCTGCTGGT 41227
Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406
| || |||||||| ||||| || || ||||| | ||| || |||||||| || | |
Sbjct 41226 CCGGAGGAATGCCCTCCTTATCCTGGATCTTCGACTTCACATTGTCGATGGTATCGGAGG 41167
Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| || || | ||||| || || || || || ||||||||||| || |||||
Sbjct 41166 ATTCCACCTCAAGAGTGATTGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 41112
Score = 141 bits (156), Expect = 2e-28
Identities = 153/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || |||||||| | |||| ||| || |||||||| || ||||||||||| |||||
Sbjct 40598 CCACCACGAAGGCGGAGAACCAGGTGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGAC 40539
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| || || || || || | || ||||| || |||
Sbjct 40538 AGGGTACGGCCGTCCTCCAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGA 40479
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||||| |||||| ||||||||||| | ||||| ||
Sbjct 40478 ATACCCTCCTTGTCCTGGATCTTTGACTTGACATTGTCGATGGTGTCGGAAGATTCCACC 40419
Query 68415 TCCAAGGTGATGGTTTTTCCCGT 68437
|| | |||||| || || |||||
Sbjct 40418 TCAAGGGTGATAGTCTTGCCCGT 40396
Score = 141 bits (156), Expect = 2e-28
Identities = 164/221 (74%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || |||||||| | |||| ||| || || ||||| || |||||||| || || ||
Sbjct 40882 CCACCACGAAGGCGGAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGAC 40823
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| || || || || || | || ||||| || |||
Sbjct 40822 AGGGTACGGCCGTCCTCCAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCCGGAGGA 40763
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| ||||| || || ||||| | ||||||| || ||||| || | || || |||
Sbjct 40762 ATGCCCTCCTTATCCTGGATCTTGGACTTGACGTTGTCAATGGTATCCGACGACTCGACT 40703
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATAT 68455
|| | |||||||| || || |||||||||||||||| |||
Sbjct 40702 TCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGACTAT 40662
>seq335
Length=221524
Score = 147 bits (162), Expect = 4e-30
Identities = 155/203 (76%), Gaps = 2/203 (1%)
Strand=Plus/Plus
Query 68261 TAGCGTGGACT--CTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318
||||||||||| | || |||||||| || || || || || | ||||| || | ||||
Sbjct 117036 TAGCGTGGACTGACCTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCATCCTCCAGCTGC 117095
Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378
|| || ||||| || || | || ||||| || |||||||| |||||||| ||||||||
Sbjct 117096 TTGCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTG 117155
Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438
| |||||| ||||| ||||| | || || || || | ||| || || || |||||
Sbjct 117156 GACTTGACATTGTCGATAGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTC 117215
Query 68439 AGGGTCTTGACGAATATCTGCAT 68461
|||||||||||||| ||||||||
Sbjct 117216 AGGGTCTTGACGAAAATCTGCAT 117238
>seq1473
Length=183801
Score = 129 bits (142), Expect = 1e-24
Identities = 136/179 (76%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| || ||||| || ||||| || || | ||||| || | |||||| || || || ||
Sbjct 105036 TTCTGAATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATC 105095
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
|| | || ||||| || |||||||| |||||||| || ||||| | ||||||| |||
Sbjct 105096 AGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCG 105155
Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|| ||||| | || || || |||| ||| ||||| || ||||| ||||||||||||||
Sbjct 105156 ATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 105214
>seq1996
Length=2768
Score = 116 bits (128), Expect = 7e-21
Identities = 241/353 (68%), Gaps = 12/353 (3%)
Strand=Plus/Minus
Query 173102 ATTGACACGATTATGCACTTTGCTGCGCAGACCCATGTGGACAACTCGTTCGGTAACTCG 173161
||||| || || ||||||||||||||||| ||||||| |||||| ||| | | |
Sbjct 1763 ATTGATACCATACTGCACTTTGCTGCGCAGTCCCATGTCGACAACAGTTTCCACAGCCCA 1704
Query 173162 CTGGCATTTACCATGAACAACGTCTACGGGACCCACGTTCTCCTGGAATGCGCGAGGCTC 173221
| ||||| | ||||| || | ||||||||| || | || || || |
Sbjct 1703 TTCAGCTTTACGCTCAACAATGTTTGCGGGACCCATGTGATGCTTGACGTAGCTTGCAAG 1644
Query 173222 TATGGCGGTGTCCAGCGGTTCATCAATGTGTCTACCGACGAAGTATACGGCGAGAGC--A 173279
| |||| || | || |||||| ||||||||||||||||||| || ||||| ||| |
Sbjct 1643 TTTGGC---ATCAAACGCTTCATCCATGTGTCTACCGACGAAGTTTATGGCGA-AGCCAA 1588
Query 173280 GTCTGGGCAAAAAAGAAGGCCTCGATGAACAC-TCGTCCCTCGAGCCAACAAACCCATAT 173338
| ||| || || | || | | ||| || ||| || || ||||||||||| ||
Sbjct 1587 GCCTG----AAGAACAGGGTGTTAAAGAAAACAACGT-ACTAGACCCAACAAACCCCTAC 1533
Query 173339 GCAGCAGCCAAGGCTGGTGCCGAAATGATGGCACGTGCATATCACACATCGTACAAGCTA 173398
|||||| |||||| | || |||||||| || || ||| | | | | || ||
Sbjct 1532 GCAGCAAGCAAGGCGGCGGCTGAAATGATTGCTAAAGCGTATTGGAAAAGTTTCCAGGTA 1473
Query 173399 CCAGTCATCGTGACGCGCGGCAACAATGTGTATGGCCCGCATCAGTTCCCCGA 173451
|| || ||| | ||| || |||||||| || || || |||||||| |||||
Sbjct 1472 CCCGTTATCATAGTGCGTGGGAACAATGTATACGGGCCTCATCAGTTTCCCGA 1420
>seq677
Length=56570
Score = 102 bits (112), Expect = 2e-16
Identities = 479/744 (64%), Gaps = 29/744 (4%)
Strand=Plus/Minus
Query 225267 CCTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGT 225326
|||||| | | |||||||||||| |||||||||||||| ||| || ||| |
Sbjct 3654 CCTTGGTCTTGACACCCTCCAGGAAACCGGGCTCGGGGAAGGTAAACTCAATCTCCGAGG 3595
Query 225327 CCTTCAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTC 225386
| ||| |||||||| || ||| ||| | ||| ||||| | | |||||| |
Sbjct 3594 CACCCAGCTCGTAGTACGACTTGGCCGAGGGGCACTTCTTGACGAACTCGGCCAGGTTAC 3535
Query 225387 CGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAGCACACTGCG 225445
| ||| | | ||||||| | || |||| || | ||| ||| | |||||| |
Sbjct 3534 CACGGTAGCGCTTAAGCTTGAAGCGCT---CGTAGTGGATAATGTGCTG-GCACACGTTG 3479
Query 225446 TCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGA-CACGTTCGTCAG--GCCCTTG 225502
|| ||||| ||||||||||| || ||||||||||| | || | | || || |
Sbjct 3478 TCCAGGAAACCAGAGTCGTGAGAAACAATGATGGAGGTGCAGG---GAGAGTTGCAC--- 3425
Query 225503 AGGTGCGTGATG-AGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAG 225561
|||| || | ||||| ||||| | || |||| ||||| || || ||||||||
Sbjct 3424 AGGTA-GTCCTCCAGCCACTTGACGTTCTTCACATCCAGATGGTTGGTGGGCTCGTCCAG 3366
Query 225562 AAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCC 225621
|||||| || || | | | || || ||| || || | ||||||||| ||||||||
Sbjct 3365 AAGCAGAATATCGGGAGCCTCGAAGACGGCACGGCACAGGGCCAGCTTCATCTTCCAGCC 3306
Query 225622 CCCGGACAGGGAGCCGATTGAAACAGAGTGCTTAGCTTCGTCA---AAGCCGTACTCCAG 225678
|| ||||||| ||| | ||| | | | || |||| ||||| | ||
Sbjct 3305 ACCAGACAGGGCCGAGATCTCACCAG--TAATCATCTG-GTCAGTGAAGCCAAAGTCGGT 3249
Query 225679 GAGCGTCTGGATAA-TGCG--CTCGGGAGAGCTGCGAGCGGCAACGTTGGGGTCGGACGA 225735
||| || | | | || || || | | || | ||||| | | | |
Sbjct 3248 CAGCTGCTTAACCACTTCGTCCTTGGACGTGGTGACACCGGCATCAGCCAGCTTCTTCAT 3189
Query 225736 GAGGTAATCATATACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACAC 225795
| | ||| |||||| || | | | | | ||| | |||||| || || | ||
Sbjct 3188 GGTCCAGTCAATGGTGGTCATCTCAGTGTCGGCAGAGTCCAGGTCGTGCTCGACAAAGAC 3129
Query 225796 CGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAG 225855
||| || || || | |||||| ||||| | ||| | || || || || |
Sbjct 3128 AGTCTTGACCTCGGACTGCTTGGGGAAACCCTCAACCTGCTCGTTGTTGATGGCGCGCAT 3069
Query 225856 CAGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTT--G 225913
||| || |||||||| |||||||||||| || ||||| | | || ||||| |
Sbjct 3068 CAGCGTCGACTTGCCCGAACCGTTGGGACCGCACAGACCGTAGCGCTGGCCACGCTTCAG 3009
Query 225914 ATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAA 225973
| | || | | ||| || || || |||||| |||| |||||||| ||||| |||
Sbjct 3008 ACGCAGATGGGTCTGG--TTAAGCAGAATCTTGGCACCGTAGGCAAGAGAGAAGGTGCAG 2951
Query 225974 TCGCACAGGTCCTCACCCTCCTCG 225997
| ||||||||||||||||||||||
Sbjct 2950 TTGCACAGGTCCTCACCCTCCTCG 2927
>seq907
Length=50168
Score = 89.7 bits (98), Expect = 9e-13
Identities = 129/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037
||||||||||| | |||||||||||| ||| | |||||||| | || | ||| | |
Sbjct 35198 TACCGCCACTGCAGGTACTGGTTGGGCGTCTTTTCCAGGTGCATTTCCACATGCTCCAGC 35257
Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC 225097
|| ||||| | ||| | ||||||| |||||| ||||| ||| |||| | |
Sbjct 35258 GCGTGCTGCTTAATGTAGCCAATGCGCAGGTTGGGGTGCTTTTCCACCTTGCCCGTCGAC 35317
Query 225098 GGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCA 225157
|| ||||||| || || | ||| || ||||| | ||||||||| || ||||| ||
Sbjct 35318 GGAATCACCTCGCCCGTCAGCATCTTAATCAGCGTTGACTTGCCCGCTCCGTTGGGCCCG 35377
Query 225158 AT 225159
||
Sbjct 35378 AT 35379
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921595730551800
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