Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq2283 149 1e-30 seq335 147 4e-30 seq1473 129 1e-24 seq1996 116 7e-21 seq677 102 2e-16 seq907 89.7 9e-13 >seq2283 Length=86879 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || |||||||| | |||| ||| || || ||||| || |||||||| || || || Sbjct 41110 CCACCACGAAGGCGGAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGAC 41051 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || || | || ||||| || ||| Sbjct 41050 AGGGTACGGCCATCCTCCAGCTGCTTACCCGCGAAAATCAGACGCTGCTGGTCCGGGGGA 40991 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| | ||||||| || ||||| || | || || ||| Sbjct 40990 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCCGACGACTCGACT 40931 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||| || || || || ||||||||||| || ||||| Sbjct 40930 TCGAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 40884 Score = 145 bits (160), Expect = 1e-29 Identities = 173/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286 |||| | || || || || |||| |||| ||| || |||||||| || |||||||| | Sbjct 41346 TTTACTGGCCGCCACGCAGACGCAGAACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGT 41287 Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346 | ||||| || || | ||||| || | |||||| || ||||| || || | || |||| Sbjct 41286 AGTCGGACAGGGTACGGCCATCCTCCAGCTGCTTACCCGCGAAAATCAGGCGCTGCTGGT 41227 Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406 | || |||||||| ||||| || || ||||| | ||| || |||||||| || | | Sbjct 41226 CCGGAGGAATGCCCTCCTTATCCTGGATCTTCGACTTCACATTGTCGATGGTATCGGAGG 41167 Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| || || | ||||| || || || || || ||||||||||| || ||||| Sbjct 41166 ATTCCACCTCAAGAGTGATTGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 41112 Score = 141 bits (156), Expect = 2e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || |||||||| | |||| ||| || |||||||| || ||||||||||| ||||| Sbjct 40598 CCACCACGAAGGCGGAGAACCAGGTGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGAC 40539 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || || || || || | || ||||| || ||| Sbjct 40538 AGGGTACGGCCGTCCTCCAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGA 40479 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||||| |||||| ||||||||||| | ||||| || Sbjct 40478 ATACCCTCCTTGTCCTGGATCTTTGACTTGACATTGTCGATGGTGTCGGAAGATTCCACC 40419 Query 68415 TCCAAGGTGATGGTTTTTCCCGT 68437 || | |||||| || || ||||| Sbjct 40418 TCAAGGGTGATAGTCTTGCCCGT 40396 Score = 141 bits (156), Expect = 2e-28 Identities = 164/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || |||||||| | |||| ||| || || ||||| || |||||||| || || || Sbjct 40882 CCACCACGAAGGCGGAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGAC 40823 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || || || || || | || ||||| || ||| Sbjct 40822 AGGGTACGGCCGTCCTCCAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCCGGAGGA 40763 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||| || || ||||| | ||||||| || ||||| || | || || ||| Sbjct 40762 ATGCCCTCCTTATCCTGGATCTTGGACTTGACGTTGTCAATGGTATCCGACGACTCGACT 40703 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATAT 68455 || | |||||||| || || |||||||||||||||| ||| Sbjct 40702 TCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGACTAT 40662 >seq335 Length=221524 Score = 147 bits (162), Expect = 4e-30 Identities = 155/203 (76%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 68261 TAGCGTGGACT--CTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318 ||||||||||| | || |||||||| || || || || || | ||||| || | |||| Sbjct 117036 TAGCGTGGACTGACCTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCATCCTCCAGCTGC 117095 Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378 || || ||||| || || | || ||||| || |||||||| |||||||| |||||||| Sbjct 117096 TTGCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTG 117155 Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438 | |||||| ||||| ||||| | || || || || | ||| || || || ||||| Sbjct 117156 GACTTGACATTGTCGATAGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTC 117215 Query 68439 AGGGTCTTGACGAATATCTGCAT 68461 |||||||||||||| |||||||| Sbjct 117216 AGGGTCTTGACGAAAATCTGCAT 117238 >seq1473 Length=183801 Score = 129 bits (142), Expect = 1e-24 Identities = 136/179 (76%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || || ||||| || ||||| || || | ||||| || | |||||| || || || || Sbjct 105036 TTCTGAATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATC 105095 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || ||||| || |||||||| |||||||| || ||||| | ||||||| ||| Sbjct 105096 AGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCG 105155 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || ||||| | || || || |||| ||| ||||| || ||||| |||||||||||||| Sbjct 105156 ATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 105214 >seq1996 Length=2768 Score = 116 bits (128), Expect = 7e-21 Identities = 241/353 (68%), Gaps = 12/353 (3%) Strand=Plus/Minus Query 173102 ATTGACACGATTATGCACTTTGCTGCGCAGACCCATGTGGACAACTCGTTCGGTAACTCG 173161 ||||| || || ||||||||||||||||| ||||||| |||||| ||| | | | Sbjct 1763 ATTGATACCATACTGCACTTTGCTGCGCAGTCCCATGTCGACAACAGTTTCCACAGCCCA 1704 Query 173162 CTGGCATTTACCATGAACAACGTCTACGGGACCCACGTTCTCCTGGAATGCGCGAGGCTC 173221 | ||||| | ||||| || | ||||||||| || | || || || | Sbjct 1703 TTCAGCTTTACGCTCAACAATGTTTGCGGGACCCATGTGATGCTTGACGTAGCTTGCAAG 1644 Query 173222 TATGGCGGTGTCCAGCGGTTCATCAATGTGTCTACCGACGAAGTATACGGCGAGAGC--A 173279 | |||| || | || |||||| ||||||||||||||||||| || ||||| ||| | Sbjct 1643 TTTGGC---ATCAAACGCTTCATCCATGTGTCTACCGACGAAGTTTATGGCGA-AGCCAA 1588 Query 173280 GTCTGGGCAAAAAAGAAGGCCTCGATGAACAC-TCGTCCCTCGAGCCAACAAACCCATAT 173338 | ||| || || | || | | ||| || ||| || || ||||||||||| || Sbjct 1587 GCCTG----AAGAACAGGGTGTTAAAGAAAACAACGT-ACTAGACCCAACAAACCCCTAC 1533 Query 173339 GCAGCAGCCAAGGCTGGTGCCGAAATGATGGCACGTGCATATCACACATCGTACAAGCTA 173398 |||||| |||||| | || |||||||| || || ||| | | | | || || Sbjct 1532 GCAGCAAGCAAGGCGGCGGCTGAAATGATTGCTAAAGCGTATTGGAAAAGTTTCCAGGTA 1473 Query 173399 CCAGTCATCGTGACGCGCGGCAACAATGTGTATGGCCCGCATCAGTTCCCCGA 173451 || || ||| | ||| || |||||||| || || || |||||||| ||||| Sbjct 1472 CCCGTTATCATAGTGCGTGGGAACAATGTATACGGGCCTCATCAGTTTCCCGA 1420 >seq677 Length=56570 Score = 102 bits (112), Expect = 2e-16 Identities = 479/744 (64%), Gaps = 29/744 (4%) Strand=Plus/Minus Query 225267 CCTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGT 225326 |||||| | | |||||||||||| |||||||||||||| ||| || ||| | Sbjct 3654 CCTTGGTCTTGACACCCTCCAGGAAACCGGGCTCGGGGAAGGTAAACTCAATCTCCGAGG 3595 Query 225327 CCTTCAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTC 225386 | ||| |||||||| || ||| ||| | ||| ||||| | | |||||| | Sbjct 3594 CACCCAGCTCGTAGTACGACTTGGCCGAGGGGCACTTCTTGACGAACTCGGCCAGGTTAC 3535 Query 225387 CGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAGCACACTGCG 225445 | ||| | | ||||||| | || |||| || | ||| ||| | |||||| | Sbjct 3534 CACGGTAGCGCTTAAGCTTGAAGCGCT---CGTAGTGGATAATGTGCTG-GCACACGTTG 3479 Query 225446 TCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGA-CACGTTCGTCAG--GCCCTTG 225502 || ||||| ||||||||||| || ||||||||||| | || | | || || | Sbjct 3478 TCCAGGAAACCAGAGTCGTGAGAAACAATGATGGAGGTGCAGG---GAGAGTTGCAC--- 3425 Query 225503 AGGTGCGTGATG-AGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAG 225561 |||| || | ||||| ||||| | || |||| ||||| || || |||||||| Sbjct 3424 AGGTA-GTCCTCCAGCCACTTGACGTTCTTCACATCCAGATGGTTGGTGGGCTCGTCCAG 3366 Query 225562 AAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCC 225621 |||||| || || | | | || || ||| || || | ||||||||| |||||||| Sbjct 3365 AAGCAGAATATCGGGAGCCTCGAAGACGGCACGGCACAGGGCCAGCTTCATCTTCCAGCC 3306 Query 225622 CCCGGACAGGGAGCCGATTGAAACAGAGTGCTTAGCTTCGTCA---AAGCCGTACTCCAG 225678 || ||||||| ||| | ||| | | | || |||| ||||| | || Sbjct 3305 ACCAGACAGGGCCGAGATCTCACCAG--TAATCATCTG-GTCAGTGAAGCCAAAGTCGGT 3249 Query 225679 GAGCGTCTGGATAA-TGCG--CTCGGGAGAGCTGCGAGCGGCAACGTTGGGGTCGGACGA 225735 ||| || | | | || || || | | || | ||||| | | | | Sbjct 3248 CAGCTGCTTAACCACTTCGTCCTTGGACGTGGTGACACCGGCATCAGCCAGCTTCTTCAT 3189 Query 225736 GAGGTAATCATATACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACAC 225795 | | ||| |||||| || | | | | | ||| | |||||| || || | || Sbjct 3188 GGTCCAGTCAATGGTGGTCATCTCAGTGTCGGCAGAGTCCAGGTCGTGCTCGACAAAGAC 3129 Query 225796 CGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAG 225855 ||| || || || | |||||| ||||| | ||| | || || || || | Sbjct 3128 AGTCTTGACCTCGGACTGCTTGGGGAAACCCTCAACCTGCTCGTTGTTGATGGCGCGCAT 3069 Query 225856 CAGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTT--G 225913 ||| || |||||||| |||||||||||| || ||||| | | || ||||| | Sbjct 3068 CAGCGTCGACTTGCCCGAACCGTTGGGACCGCACAGACCGTAGCGCTGGCCACGCTTCAG 3009 Query 225914 ATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAA 225973 | | || | | ||| || || || |||||| |||| |||||||| ||||| ||| Sbjct 3008 ACGCAGATGGGTCTGG--TTAAGCAGAATCTTGGCACCGTAGGCAAGAGAGAAGGTGCAG 2951 Query 225974 TCGCACAGGTCCTCACCCTCCTCG 225997 | |||||||||||||||||||||| Sbjct 2950 TTGCACAGGTCCTCACCCTCCTCG 2927 >seq907 Length=50168 Score = 89.7 bits (98), Expect = 9e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037 ||||||||||| | |||||||||||| ||| | |||||||| | || | ||| | | Sbjct 35198 TACCGCCACTGCAGGTACTGGTTGGGCGTCTTTTCCAGGTGCATTTCCACATGCTCCAGC 35257 Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC 225097 || ||||| | ||| | ||||||| |||||| ||||| ||| |||| | | Sbjct 35258 GCGTGCTGCTTAATGTAGCCAATGCGCAGGTTGGGGTGCTTTTCCACCTTGCCCGTCGAC 35317 Query 225098 GGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCA 225157 || ||||||| || || | ||| || ||||| | ||||||||| || ||||| || Sbjct 35318 GGAATCACCTCGCCCGTCAGCATCTTAATCAGCGTTGACTTGCCCGCTCCGTTGGGCCCG 35377 Query 225158 AT 225159 || Sbjct 35378 AT 35379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921595730551800