Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1092 419 4e-112 seq1750 315 1e-80 >seq1092 Length=189081 Score = 419 bits (464), Expect = 4e-112 Identities = 611/855 (71%), Gaps = 20/855 (2%) Strand=Plus/Minus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||| ||||| || ||| |||||| |||||||||||||||||| Sbjct 137793 ATCTGGCAAATGTACAAAAAGGCCGAGGCGTCCTTCTGGACTGCCGAGGAGATTGACCTG 137734 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA----GAACGAAAAGTTTTTCCTCAA 42415 |||||||| | || |||| | || | ||| | ||||||||| ||| || Sbjct 137733 TCCAAGGACCTGCACGACTGGAACA-ACCGCATGAACAAGGACGAAAAGTACTTCATCTC 137675 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 || | ||||||||||| ||||| || |||||||| ||||| |||||||||| | | Sbjct 137674 GCACGTGCTGGCCTTCTTTGCCGCGTCGGACGGCATTGTCAACGAGAACCTGGTCGAGCG 137615 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 ||| | ||||| ||| | ||||| ||||||||||||||||| ||||| || Sbjct 137614 CTTCTCGGGCGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTTCAGATCATGAT 137555 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGT 42595 |||||| | ||||| ||| ||| | ||| | ||||||||||| ||| |||| Sbjct 137554 GGAGAACATCCACTCCGAGACATACTCGCTGCTGATTGACACGTACATCAAGGAGCCCGC 137495 Query 42596 CGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGA 42655 | |||| | | ||||| || ||||| || || || ||||||||| ||||| || Sbjct 137494 CCAGCGCAGCTACCTGTTTAACGCCATTGATACTATTCCCTGCATCCGCCGCAAGGCCGA 137435 Query 42656 CTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTT 42715 |||||| ||||| ||||| | | ||| | || || | | | | ||||| ||||| Sbjct 137434 CTGGGCCCTCAAGTGGATTGCCGACCACGAGTCGACCTTTGCCCAACGTCTGGTGGCCTT 137375 Query 42716 TACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCT---CAA 42772 | |||||||||| ||||||||||||||||||||||| || |||||||| ||||| ||| Sbjct 137374 TGCCGCCGTCGAAGGCATCTTCTTCTCGGGCGCCTTTGCTTCCATCTTTTGGCTGCGCAA 137315 Query 42773 GCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGG 42832 || ||| || |||||||| || ||||| || ||||| || || | | |||||||| Sbjct 137314 GC--GCGGTCTC-ATGCCCGGCCTGACCTTTTCCAACGAGCTGATTTCCCGCGACGAGGG 137258 Query 42833 GCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAA--GCCCTCG 42890 ||||| | |||||||||||||| || |||||| ||||||| |||| |||| | Sbjct 137257 CCTGCACACAGACTTTGCCTGCCTGCTCTTCTCG---CACCTCA---ACAACCGCCCCAG 137204 Query 42891 -AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCAC 42949 ||| ||| | | || |||||||| || || || | || || ||||||||| | || Sbjct 137203 CAAGAAGCTGATTGAGGAAATCATCACCGACGCTGTCGCCATTGAAAAGGAGTTCTTGAC 137144 Query 42950 GCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCA 43009 | | |||||| | ||| ||||||||||| |||||| ||| ||||||| | Sbjct 137143 CGACGCCCTGCCCTGCGCTCTGCTCGGCATGAACGCCGACCTGATGAAGCAGTACATTGA 137084 Query 43010 GTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTG 43069 || || ||||||| ||| ||| | | || | ||||| | | | Sbjct 137083 GTTTGTTGCCGACCGTCTGCTGGTCGCCCTCGGCAACGAAAAGGTCTACCGCTCCACCAA 137024 Query 43070 CCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCG 43129 |||||| ||||| ||||||||||||||| | | |||||||||||||| ||||||||||| Sbjct 137023 CCCCTTTGACTTCATGGAGAACATCTCGCTCGGCGGCAAGACCAACTTCTTCGAGAAGCG 136964 Query 43130 CGTCGCCGACTACCA 43144 |||| ||||||||| Sbjct 136963 TGTCGGCGACTACCA 136949 >seq1750 Length=138661 Score = 315 bits (348), Expect = 1e-80 Identities = 1095/1685 (65%), Gaps = 49/1685 (3%) Strand=Plus/Minus Query 243940 CTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTTCGA- 243998 ||| || ||||| || | |||||||| | | ||||| || ||||| || || || Sbjct 36639 CTGCGAAATCTCCCACACTGTCTTGTACAGAGCCTTGATGTCGTCGGG-AATGCTGGGAA 36581 Query 243999 TGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACAGGC 244058 ||||||| | || || || | | | || | || | ||||||||| |||||| | Sbjct 36580 TGTTCTGAATAGAACCGTTCTCGGCAATAATGCGGTTCTTCATGTTATCAGACCACAGAC 36521 Query 244059 CCAAGCGCTCCAGCGCCTCG-ACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGACAGC 244117 ||| | |||| | | || | ||| | |||||| ||||| ||||| || | ||| Sbjct 36520 CCAGGTCAACCAG-GTCACGCAGCAGCCACGGGTTCACAACCTGGAACTCACCGGCAAGC 36462 Query 244118 ACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATC 244177 || || |||||||| | |||| || |||||| | || ||| |||||||||| ||| Sbjct 36461 ACACGACGCTGGTAAATGTTGGAAGTGTACGGCTCAAAGCACTCATTGTTGCCCAGAATC 36402 Query 244178 TGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTC 244237 |||| |||||| || || |||||||| | || |||||| ||| | ||| |||||| | Sbjct 36401 TGCGACGTGCTGGCCGTAGGCATGGGAGCCAGCAGCAGCGAGTTGCGCACACCGTGCTGC 36342 Query 244238 TGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGTTTGAGG 244297 | ||| | ||||| ||||||||| |||||| | | ||| Sbjct 36341 TTGATCTGCTCCTTGAGCGAAGCCCAGTCCCA---------GAGGTCACTGGGAGTGACA 36291 Query 244298 CCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAG 244357 |||||||||||||||||| | |||| || || ||||||||||||| ||| Sbjct 36290 TTCCACATGTCAAACTGCAGGATGCCCTGCGAAACAGGCGAACCCTCGTAGGTCGAGTAC 36231 Query 244358 GGACCGTCGCGCTGGGCCAGCTTACAGCTCTC-GTCGAGGGCGGCGTAGTAGATGGTCTC 244416 | || || || ||| | || | | | ||| ||||| |||| ||| || ||||| Sbjct 36230 GTGCCCTCCTCCTTGGCAATCTCCATGGACGCCGTC-AGGGCAGCGTGGTAAATAGTCTC 36172 Query 244417 GAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCATCATCAT 244476 |||||| |||| | | ||| |||| | | | || || || | | || Sbjct 36171 AAAGATCTGAGTGTTGAGCTTGCGAGCCTCGGCCGACTCAAACGGCATACGTAGAGCCAA 36112 Query 244477 GAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCG 244536 ||| | || ||||| ||||| || || | ||| || || | ||| ||| ||||| | Sbjct 36111 AAAGGCATCAGCCAGACCCTGGACACCAACGCCAATAGGACGGTGGCGCATGTTGCTGTT 36052 Query 244537 CATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGAT 244596 || |||||||| ||||| ||| | || || | ||| || ||||| | Sbjct 36051 GTGTGCCTCGGGCACAGGGTAGTGATTGACATCAATGATGCGGTTCAGATTGCGCACCAC 35992 Query 244597 CATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGGT 244656 || | ||| ||| |||| ||| |||||||| | | | |||| | | || Sbjct 35991 CACCTTGGTGACATCGTGCAGCTTCTGGAAGTCGTA------GCGGTTCTCGCTG-TAGT 35939 Query 244657 GATCCTCACAAACTCGTTGAGGGCGAC-GCT-GGCCAGGTTGCAGACGGCCACCTCCTCC 244714 | |||||| | || ||| | || |||||||||||| || || ||||| || Sbjct 35938 CA-----ACAAAC--GATGGCAGCGCCAGCGAGGCCAGGTTGCACACAGCAACCTCATCA 35886 Query 244715 GAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGC 244774 | | ||||| || |||||| ||||| ||||| || ||||| ||||| | | Sbjct 35885 GGGGCACAGTACTCGATAATCTCAGTGCACAGGTTGGAGCTGCGAATGGTACCCAGATTC 35826 Query 244775 TGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCG 244834 | || ||| |||| ||||||| ||||||||| ||||| || || || |||||| Sbjct 35825 TTTTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCATAAACGGGTTGCCAGTCTCG 35766 Query 244835 AGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTG 244894 |||||| | | | | | ||| || | | |||||||||| | ||| | | Sbjct 35765 GTCTGGGCCTCCAAAATGGCATACCACAGCTTCTGGGCCTTGACCGACTGCCGACCACGG 35706 Query 244895 CCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGG 244954 ||||| |||||| |||||| ||||| || || ||| || || | ||| Sbjct 35705 CCCTCCTTCTCGTACTTTTCGTACAGAGCCTCAAATTCCTCGCCGTAGCAGTCAGCCAGG 35646 Query 244955 CCGGGGCACGACGCCGGG-CACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCAT 245013 || |||||| || ||| ||||| || |||| | || | || ||| | || ||| Sbjct 35645 CCAGGGCACT-CGTTGGGACACATCAGGGTCCAGTTCTCGTTCTTCTCGACACGCTTCAT 35587 Query 245014 GAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCC 245073 ||| | |||||| ||||| || || |||| ||||| | || | ||| ||| || Sbjct 35586 GAACATGTCGGGAATCCACAGAGCTAGGAACAGGTCACGGGCGCGGACCTCCTCCTTACC 35527 Query 245074 AGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGAC 245133 | ||||| | ||| || | || ||||| || ||| ||||||| ||||||| ||| | Sbjct 35526 ATGATTCTTGCGCAGGTCAAGGAACTCAAACACATCGGCGTGCCACGGCTCCAGGTAAAT 35467 Query 245134 AGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG-CGTTGA 245192 || | || || || ||||||||||| |||||||| | ||| || | ||||| Sbjct 35466 GGCAAAAGCACCAGGGCGCTTGTTGCCGCCCTGGTCGA-CATAGCGGGCAGTGTTGTTGA 35408 Query 245193 AGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGC 245252 | | |||||| | || | |||||||| ||| |||||||| || ||||| | || Sbjct 35407 ACACGCGCAGCATGGGGATAATGCCGTTGGAGGTACCGTTGGTACCAGCAATGTACGAGC 35348 Query 245253 CCTTGCCCCTGAGGTTGCTGATGGACAT----GCCTAGTCCGCCGGCGTGCTTGGAGATG 245308 | || | | || | | | || |||| ||| | || || || |||||| || Sbjct 35347 CAGTGGC---GCGGATAC-GGTGAACATTGAGGCCGATACCACCAGCCATCTTGGAAATC 35292 Query 245309 AGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGC 245368 | || || |||||| || || ||||| || || |||| |||||||| | | Sbjct 35291 ATAGCACAAGTCTTGAGAGTATCGTAAATGCCTTCAATCGAGTCCTCCTTCATGTCAACC 35232 Query 245369 AGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCG 245428 |||||||| || |||||||||| || || | | | ||||||||||||||| |||| Sbjct 35231 AGAAAGCAAGATGACAGCTGGGCCTGAGGAGTACCAGCGTTGAACAGAGTGGGCGAGGCG 35172 Query 245429 TGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCG 245488 || |||||| | |||||| | || |||||||| | | ||||| |||| Sbjct 35171 TGAGTAAAGAACTTGCTCGACATGAGGTTGTACGTCTCAATGACGCGGTCGACTCTGTCA 35112 Query 245489 CCGTGGATCTGCAGGGCGCAC-CTCATGAGGGTGTGCTGGGGCGTCTCGATGGGTCCCTC 245547 || ||| | || ||| | ||| | |||||||||| ||||| | | Sbjct 35111 CCCCAGATGCCAACAGC-CACACGCATAATCATGTGCTGGGGACGCTCGA--CAATCTTG 35055 Query 245548 GGGTCC--CTTGAGCATGTAGGAGCGCTCGAGCGTCTTGAACCCAAAGTACGAGTAGCCA 245605 |||| ||| |||| ||| || ||||| || |||||||| ||||||||| |||| | Sbjct 35054 CCGTCCAACTTCAGCAGGTACGAACGCTCCAGGGTCTTGAAGCCAAAGTACTGGTAGTTA 34995 Query 245606 AAGTC 245610 ||||| Sbjct 34994 AAGTC 34990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944311873184400