Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq1092 123 3e-23
>seq1092
Length=189081
Score = 123 bits (136), Expect = 3e-23
Identities = 522/813 (64%), Gaps = 15/813 (2%)
Strand=Plus/Plus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCT-GATATTCTCCA 125816
|||||| || || ||||||||||||||||| ||||| ||| || ||| ||| |||||||
Sbjct 136951 GTAGTCGCCGACACGCTTCTCGAAGAAGTTGGTCTTGCCG-CCGAGCGAGATGTTCTCCA 137009
Query 125817 TAAAATCAAATGGGTTCTTTGAGTTCCAAAT-TGTTGGCACCCCAATCTGTTTGAGGAGA 125875
| || ||||| ||||| | ||| | | | || | || | | || |||
Sbjct 137010 TGAAGTCAAAGGGGTTGGTGGAGCGGTAGACCTTTTCGTTGCCGAGGGCGACC-AGCAGA 137068
Query 125876 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 125935
|| || | || |||||||||||| |||| || | |||||| |||| ||
Sbjct 137069 CGGTCGGCAACAAACTCAATGTACTGCTTCATCAGGTCGGCGTTCATGCCGAGCAGAGCG 137128
Query 125936 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCG 125995
|| || || ||||| | |||| |||| ||||| | || || || | ||| |
Sbjct 137129 CAGGGCAGGGCGTCGGTCAAGAACTCCTTTTCAATGGCGACAGCGTCGGTGATGATTTCC 137188
Query 125996 TGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCT 126055
| ||| | | | || | ||| | | |||||| |||||| |||
Sbjct 137189 TCAATCAGCTTCTTGCTGGGGCGGTTGTTGAGGTGCGAGAAGAGCAGGCAGGCAAAGTCT 137248
Query 126056 TGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGA 126115
||| || |||||||| ||||| || || || || || ||| ||| || |||||||||
Sbjct 137249 GTGTGCAGGCCCTCGTCGCGGGAAATCAGCTCGTTGGAAAAGGTCAGGCCGGGCATGAGA 137308
Query 126116 CCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACA 126175
|| ||||| || ||| || || | | ||| | |||||||||||||| || || ||
Sbjct 137309 CCGCGCTTGCGCAGCCAAAAGATGGAAGCAAAGGCGCCCGAGAAGAAGATGCCTTCGACG 137368
Query 126176 CACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACT--TTGT-GTCAAACCACTTC 126232
|| || || | ||||| | ||||||| ||||| | || | ||| ||||||
Sbjct 137369 GCGGCAAAGGCCACCAGACGTTGGGCAAAGG---TCGACTCGTGGTCGGCAATCCACTTG 137425
Query 126233 ATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCC 126292
| ||||| | ||||| ||| || || | || | || || | ||| || |
Sbjct 137426 AGGGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTATCAATGGCGTTAAACAGGTAG 137485
Query 126293 TTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGG 126352
| | | || || ||||||||| | || || || || ||||| ||| ||||
Sbjct 137486 CTGCGCTGGGCGGGCTCCTTGATGTACGTGTCAATCAGCAGCGAGTATGTCTCGGAGTGG 137545
Query 126353 ACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTC 126411
| | | ||| || | |||| | ||||||| |||| || ||| ||||| |||||
Sbjct 137546 ATGTTCTCCATCAT-GATCTGAAAGCCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCTC 137604
Query 126412 ATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGC 126471
| | || | | ||||| ||||| || || ||| | ||||| || ||
Sbjct 137605 GCCCGAGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGACGCGGCAAAGAAGGC 137664
Query 126472 CAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAG 126528
||| | | | ||||| | || ||| | || ||||| || | |||||||||| ||
Sbjct 137665 CAGCACGTGCGAGATGAAGTACTTTTCGTCCTTGTTCATGCGGTTGTTCCAGTCGTGCAG 137724
Query 126529 ATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561
||||| || || || | |||||| ||||||||
Sbjct 137725 GTCCTTGGACAGGTCAATCTCCTCGGCAGTCCA 137757
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597336314080200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |