Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1092 123 3e-23 >seq1092 Length=189081 Score = 123 bits (136), Expect = 3e-23 Identities = 522/813 (64%), Gaps = 15/813 (2%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCT-GATATTCTCCA 125816 |||||| || || ||||||||||||||||| ||||| ||| || ||| ||| ||||||| Sbjct 136951 GTAGTCGCCGACACGCTTCTCGAAGAAGTTGGTCTTGCCG-CCGAGCGAGATGTTCTCCA 137009 Query 125817 TAAAATCAAATGGGTTCTTTGAGTTCCAAAT-TGTTGGCACCCCAATCTGTTTGAGGAGA 125875 | || ||||| ||||| | ||| | | | || | || | | || ||| Sbjct 137010 TGAAGTCAAAGGGGTTGGTGGAGCGGTAGACCTTTTCGTTGCCGAGGGCGACC-AGCAGA 137068 Query 125876 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 125935 || || | || |||||||||||| |||| || | |||||| |||| || Sbjct 137069 CGGTCGGCAACAAACTCAATGTACTGCTTCATCAGGTCGGCGTTCATGCCGAGCAGAGCG 137128 Query 125936 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCG 125995 || || || ||||| | |||| |||| ||||| | || || || | ||| | Sbjct 137129 CAGGGCAGGGCGTCGGTCAAGAACTCCTTTTCAATGGCGACAGCGTCGGTGATGATTTCC 137188 Query 125996 TGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCT 126055 | ||| | | | || | ||| | | |||||| |||||| ||| Sbjct 137189 TCAATCAGCTTCTTGCTGGGGCGGTTGTTGAGGTGCGAGAAGAGCAGGCAGGCAAAGTCT 137248 Query 126056 TGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGA 126115 ||| || |||||||| ||||| || || || || || ||| ||| || ||||||||| Sbjct 137249 GTGTGCAGGCCCTCGTCGCGGGAAATCAGCTCGTTGGAAAAGGTCAGGCCGGGCATGAGA 137308 Query 126116 CCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACA 126175 || ||||| || ||| || || | | ||| | |||||||||||||| || || || Sbjct 137309 CCGCGCTTGCGCAGCCAAAAGATGGAAGCAAAGGCGCCCGAGAAGAAGATGCCTTCGACG 137368 Query 126176 CACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACT--TTGT-GTCAAACCACTTC 126232 || || || | ||||| | ||||||| ||||| | || | ||| |||||| Sbjct 137369 GCGGCAAAGGCCACCAGACGTTGGGCAAAGG---TCGACTCGTGGTCGGCAATCCACTTG 137425 Query 126233 ATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCC 126292 | ||||| | ||||| ||| || || | || | || || | ||| || | Sbjct 137426 AGGGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTATCAATGGCGTTAAACAGGTAG 137485 Query 126293 TTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGG 126352 | | | || || ||||||||| | || || || || ||||| ||| |||| Sbjct 137486 CTGCGCTGGGCGGGCTCCTTGATGTACGTGTCAATCAGCAGCGAGTATGTCTCGGAGTGG 137545 Query 126353 ACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTC 126411 | | | ||| || | |||| | ||||||| |||| || ||| ||||| ||||| Sbjct 137546 ATGTTCTCCATCAT-GATCTGAAAGCCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCTC 137604 Query 126412 ATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGC 126471 | | || | | ||||| ||||| || || ||| | ||||| || || Sbjct 137605 GCCCGAGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGACGCGGCAAAGAAGGC 137664 Query 126472 CAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAG 126528 ||| | | | ||||| | || ||| | || ||||| || | |||||||||| || Sbjct 137665 CAGCACGTGCGAGATGAAGTACTTTTCGTCCTTGTTCATGCGGTTGTTCCAGTCGTGCAG 137724 Query 126529 ATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 ||||| || || || | |||||| |||||||| Sbjct 137725 GTCCTTGGACAGGTCAATCTCCTCGGCAGTCCA 137757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597336314080200