Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1750 203 3e-47 >seq1750 Length=138661 Score = 203 bits (224), Expect = 3e-47 Identities = 609/930 (65%), Gaps = 20/930 (2%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||||| |||||| || |||||| |||||||| || ||| |||| ||| Sbjct 34996 AACTACCAGTACTTTGGCTTCAAGACCCTGGAGCGTTCGTACCTGCTGAAGTTGGACGGC 35055 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGC------CATCGGGATTCAC 93828 | | || |||||| || || || || | ||||| || || |||| || | || Sbjct 35056 AAGATTGTCGAGCGTCCCCAGCACATGATTATGCGTGTGGCTGTTGGCATCTGGGGTGAC 35115 Query 93829 GGCCACGACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACC 93888 | |||| || || || | | | || |||| | |||| | ||| Sbjct 35116 AGAGTCGACC-GCGTCAT----TGAGA-CGTACAACCTCATGTCGAGCAAGTTCTTTACT 35169 Query 93889 ATGGCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTG-TTT 93947 ||| | || || ||||||||||| || || || | | ||| |||| || || ||| Sbjct 35170 CACGCCTCGCCCACTCTGTTCAACGCTGGTACTCCTCAGGCCCAGCTGTCATCTTGCTTT 35229 Query 93948 CCTGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGC 94007 | | |||| | |||| ||||| || || |||| ||| | |||||| ||||| Sbjct 35230 CTGGTTGAC-ATGAAGGAGGACTCGATTGAAGGCATTTACGATACTCTCAAGACTTGTGC 35288 Query 94008 GACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGG 94065 | || || || || || || ||||| ||| ||| ||| |||| || |||| Sbjct 35289 TATGATTTCCAAGATGGCTGGTGGTATCGGCCTCAATGTTCAC--CGTATCCGCGCCACT 35346 Query 94066 GGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTC 94125 || || ||||| |||||||| || |||||||||||| | |||| ||||| || || Sbjct 35347 GGCTCGTACATTGCTGGTACCAACGGTACCTCCAACGGCATTATCCCCATGCTGCGCGTG 35406 Query 94126 TTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCG 94185 ||||||||| | || ||||| || |||||||| || | | | ||| |||| || Sbjct 35407 TTCAACAACACTGCCCGCTATGTCGACCAGGGCGGCAACAAGCGCCCTGGTGCTTTTGCC 35466 Query 94186 GTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCAC 94245 | || || ||||| |||||||| || ||| | ||| | |||||||| ||||| || Sbjct 35467 ATTTACCTGGAGCCGTGGCACGCCGATGTGTTTGAGTTCCTTGACCTGCGCAAGAATCAT 35526 Query 94246 GGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTT 94305 || || || || | ||| | ||||| ||| ||||| ||| | || ||| | || Sbjct 35527 GGTAAGGAGGAGGTCCGCGCCCGTGACCTGTTCCTAGCTCTGTGGATTCCCGACATGTTC 35586 Query 94306 ATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGA 94365 ||||| || |||||||| ||| ||||| || | |||||||| || || || || Sbjct 35587 ATGAAGCGTGTCGAGAAGAACGAGAACTGGACCCTGATGTGTCCCAACGAGTGCCCTGGC 35646 Query 94366 CTGTCCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGC 94425 ||| | ||| | || | ||||| | |||| | ||||| | ||||| Sbjct 35647 CTGGCTGACTGCTACGGCGAGGAATTTGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGC 35706 Query 94426 AAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTG 94485 | || || | | || |||||||||| || || |||| | ||| Sbjct 35707 CGTGGTCGGCAGTCGGTCAAGGCCCAGAAGCTGTGGTATGCCATTTTGGAGGCCCAGACC 35766 Query 94486 GAGACGGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCA 94544 ||||| || | || | || ||| |||||| | ||| |||| |||| |||||| | Sbjct 35767 GAGACTGGCAACCCGTTTATGCTGTACAAGGACCACTG-CAACCGCAAGAGCAACCAAAA 35825 Query 94545 GCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCC 94604 | | || || || ||||| || |||||||| |||||| ||||||| | | || Sbjct 35826 GAATCTGGGTACCATTCGCAGCTCCAACCTGTGCACTGAGATTATCGAGTACTGTGCCCC 35885 Query 94605 GGACGAGATTGCTGTGTGTAACCTGGGCTC 94634 || ||| |||||||||| ||||||| ||| Sbjct 35886 TGATGAGGTTGCTGTGTGCAACCTGGCCTC 35915 Score = 158 bits (174), Expect = 1e-33 Identities = 213/297 (72%), Gaps = 0/297 (0%) Strand=Plus/Plus Query 95077 CACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATC 95136 ||||||||| ||| ||||||| |||| |||||||| |||||| |||| ||||||| Sbjct 36346 CACGGTGTGCGCAACTCGCTGCTGCTGGCTCCCATGCCTACGGCCAGCACGTCGCAGATT 36405 Query 95137 CTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTC 95196 || |||||||| |||| || || || | ||| |||||| | ||| | | || ||||| Sbjct 36406 CTGGGCAACAATGAGTGCTTTGAGCCGTACACTTCCAACATTTACCAGCGTCGTGTGCTT 36465 Query 95197 GCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTG 95256 ||||| || |||| || | ||| | || || || |||||| |||||| || Sbjct 36466 GCCGGTGAGTTCCAGGTTGTGAACCCGTGGCTGCTGCGTGACCTGGTTGACCTGGGTCTG 36525 Query 95257 TGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCG 95316 ||| ||| || | ||||||| | | || ||||| || | |||||||| || Sbjct 36526 TGGTCTGATAACATGAAGAACCGCATTATTGCCGAGAACGGTTCTATTCAGAACATTCCC 36585 Query 95317 CAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 || || || ||||||||||| || |||||||| ||||||||||| |||||||| Sbjct 36586 AGCATTCCCGACGACATCAAGGCTCTGTACAAGACAGTGTGGGAGATTTCGCAGCGC 36642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494708883947400