Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq2283 96.9 3e-15
seq1750 86.0 6e-12
seq335 86.0 6e-12
>seq2283
Length=86879
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191
|| || || || || || ||||| ||||| || || || | ||| ||| |||
Sbjct 41092 ACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCC 41033
Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251
| || || || ||| | |||| || ||||||||||| ||||| || || || || ||
Sbjct 41032 AGCTGCTTACCCGCGAAAATCAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGG 40973
Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310
|| || |||| || | || | ||| || || ||||||||||||||||| | || ||
Sbjct 40972 ATCTTGGACTTGA-CGTTGTCAATGGTATCCGACGACTCGACTTCGAGAGTGATGGTCTT 40914
Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|||||| ||||| || || || ||||||||
Sbjct 40913 GCCGGTAAGAGTCTTGACGAAGATTTGCAT 40884
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
|| || || || | || || || || || || || ||||| ||||| || || |||
Sbjct 41338 CCGCCACGCAGACGCAGAACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 41279
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| ||| ||| |||| || || || ||| | |||| || ||||||||||| |||
Sbjct 41278 AGGGTACGGCCATCCTCCAGCTGCTTACCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 41219
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293
||||| || ||||| || || || || | || | ||| ||||| || || ||
Sbjct 41218 ATGCCCTCCTTATCCTGGATCTTCGACTTCACATTGTCGATGGTATCGGAGGATTCCACC 41159
Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| ||||| | || |||||||| ||||| || || || ||||||||
Sbjct 41158 TCAAGAGTGATTGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 41112
Score = 86.0 bits (94), Expect = 6e-12
Identities = 107/144 (74%), Gaps = 2/144 (1%)
Strand=Plus/Minus
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||| || ||||| || | |||| || ||||||||||| |||||||| || |||
Sbjct 40810 TCCTCCAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTA 40751
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
|| || || || |||| || | || | ||| || || ||||||||||||||||| |
Sbjct 40750 TCCTGGATCTTGGACTTGA-CGTTGTCAATGGTATCCGACGACTCGACTTCGAGAGTGAT 40692
Query 45305 CGTTTTGCCGGTTAGAGTTTTTAC 45328
|| |||||||| || || || ||
Sbjct 40691 GGTCTTGCCGGTGAGGGTCTTGAC 40668
>seq1750
Length=138661
Score = 86.0 bits (94), Expect = 6e-12
Identities = 149/213 (70%), Gaps = 4/213 (2%)
Strand=Plus/Plus
Query 124105 TGCAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGACTGGAGCGTTTTAAAAC 124164
|||||| ||||||||||||| || || | | | ||||||||| || | ||
Sbjct 36272 TGCAGTTTGACATGTGGAATGTCACTCCCAGTGACCTCTGGGACTGG-GCTTCGCTCAAG 36330
Query 124165 AACGCATATC--GACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGC 124222
| ||| ||| | ||||||| |||| ||||||||| || |||| |||||| |||||
Sbjct 36331 GA-GCAGATCAAGCAGCACGGTGTGCGCAACTCGCTGCTGCTGGCTCCCATGCCTACGGC 36389
Query 124223 AACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAATTTGTA 124282
| ||| | || ||| | || ||||| || | ||| ||||||| |||| ||| | ||
Sbjct 36390 CAGCACGTCGCAGATTCTGGGCAACAATGAGTGCTTTGAGCCGTACACTTCCAACATTTA 36449
Query 124283 CGTGCGACGAGTGTTAGCCGGCGATTTTCAAGT 124315
| ||| || ||| | ||||| || || || ||
Sbjct 36450 CCAGCGTCGTGTGCTTGCCGGTGAGTTCCAGGT 36482
>seq335
Length=221524
Score = 86.0 bits (94), Expect = 6e-12
Identities = 113/157 (72%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244
||| |||| || || || ||| | |||| || ||||||||||| |||||||| || ||
Sbjct 117083 ATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTT 117142
Query 45245 ATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
|| ||||| || |||| || | ||||| || ||||| || ||||| ||||
Sbjct 117143 GTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCCGAGGACTCAACCTCGAGGGTAAT 117202
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
||| || || || || || || || ||||| ||||||
Sbjct 117203 CGTCTTACCCGTCAGGGTCTTGACGAAAATCTGCATC 117239
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451990120157400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |