Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq1092 136 5e-27
>seq1092
Length=189081
Score = 136 bits (150), Expect = 5e-27
Identities = 527/814 (65%), Gaps = 17/814 (2%)
Strand=Plus/Plus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
|||||| ||||| ||||||||||||||||| ||||| || |||| ||| ||||||||
Sbjct 136951 GTAGTCGCCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGCGAGATGTTCTCCAT 137010
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAAT-TGTTGGCACCCCAATCTGTTTGAGGAGAC 127349
|| ||||| ||||| | ||| | | | || | || | | || ||||
Sbjct 137011 GAAGTCAAAGGGGTTGGTGGAGCGGTAGACCTTTTCGTTGCCGAGGGCGACC-AGCAGAC 137069
Query 127350 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 127409
| || | || |||||||||||| |||| || | |||||| |||| || |
Sbjct 137070 GGTCGGCAACAAACTCAATGTACTGCTTCATCAGGTCGGCGTTCATGCCGAGCAGAGCGC 137129
Query 127410 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGT 127469
| || || ||||| | |||| |||| |||||| | ||||| || | ||| | |
Sbjct 137130 AGGGCAGGGCGTCGGTCAAGAACTCCTTTTCAATGGCGACAGCGTCGGTGATGATTTCCT 137189
Query 127470 GAATAGTGTCCACCCCAGGTCTATTGCGTAAAGT-CTTGAAGAGTTCCA--CAG-CAAAC 127525
||| | | | || | ||| | | || | |||||| || ||| ||||
Sbjct 137190 CAATCAGCTTCTTGCTGGGGCGGTTGT-TGAGGTGCGAGAAGAG---CAGGCAGGCAAAG 137245
Query 127526 TCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATG 127585
||| ||| || |||||||| ||||| || || || || || ||| ||| || ||||||
Sbjct 137246 TCTGTGTGCAGGCCCTCGTCGCGGGAAATCAGCTCGTTGGAAAAGGTCAGGCCGGGCATG 137305
Query 127586 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCC 127645
||||| ||||| || ||| || || | | ||| | ||| ||||||||||| || ||
Sbjct 137306 AGACCGCGCTTGCGCAGCCAAAAGATGGAAGCAAAGGCGCCCGAGAAGAAGATGCCTTCG 137365
Query 127646 ACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAACCACTT 127704
|| || || || | ||||| | |||||||| || | | || ||| ||||||
Sbjct 137366 ACGGCGGCAAAGGCCACCAGACGTTGGGCAAAGG-TCGACTCGTGGTCGGCAATCCACTT 137424
Query 127705 CATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTC 127764
| ||||| | ||||| ||| || || | || | || || | ||| || |
Sbjct 137425 GAGGGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTATCAATGGCGTTAAACAGGTA 137484
Query 127765 CTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTG 127824
| | | || || ||||||||| | || || || || ||||| ||| |||
Sbjct 137485 GCTGCGCTGGGCGGGCTCCTTGATGTACGTGTCAATCAGCAGCGAGTATGTCTCGGAGTG 137544
Query 127825 GACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCT 127883
|| | | ||| || | |||| | ||||||| |||| || ||| ||||| ||||
Sbjct 137545 GATGTTCTCCATCAT-GATCTGAAAGCCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCT 137603
Query 127884 CATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACG 127943
| | | || | | ||||| ||||| || || ||| | ||||| || |
Sbjct 137604 CGCCCGAGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGACGCGGCAAAGAAGG 137663
Query 127944 CCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCGA 128000
|||| | | | ||||| | || ||| | || ||||| || | |||||||||| |
Sbjct 137664 CCAGCACGTGCGAGATGAAGTACTTTTCGTCCTTGTTCATGCGGTTGTTCCAGTCGTGCA 137723
Query 128001 GATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034
| ||||| || || || | |||||| ||||||||
Sbjct 137724 GGTCCTTGGACAGGTCAATCTCCTCGGCAGTCCA 137757
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613489446635400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |