Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq2283 136 9e-27
seq335 127 5e-24
seq1473 98.7 2e-15
>seq2283
Length=86879
Score = 136 bits (150), Expect = 9e-27
Identities = 161/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | ||| || |||||||| || |||||||| |||| ||||||||| | || ||
Sbjct 41332 CGCAGACGCAGAACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTA 41273
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| ||||||||||| || ||||| || || ||||||||||||||| ||| ||
Sbjct 41272 CGGCCATCCTCCAGCTGCTTACCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCC 41213
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| |||||| |||| ||| || | | ||| || || |
Sbjct 41212 TCCTTATCCTGGATCTTCGACTTCACATTGTCGATGGTATCGGAGGATTCCACCTCAAGA 41153
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || || ||||| || || || |||||
Sbjct 41152 GTGATTGTCTTGCCGGTAAGAGTCTTGACGAAGATTTG 41115
Score = 132 bits (146), Expect = 1e-25
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | || || ||||| ||||| |||||||| |||| ||||||||||| || ||
Sbjct 41104 CGAAGGCGGAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTA 41045
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| ||||||||||| || ||||| || ||||||||||||||||| ||| ||
Sbjct 41044 CGGCCATCCTCCAGCTGCTTACCCGCGAAAATCAGACGCTGCTGGTCCGGGGGAATACCC 40985
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| ||| ||| || | ||| || | | || || || |
Sbjct 40984 TCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCCGACGACTCGACTTCGAGA 40925
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || || ||||| || || || |||||
Sbjct 40924 GTGATGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTG 40887
Score = 131 bits (144), Expect = 4e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | || || ||||||||||| |||||||| |||| ||| ||||| | || ||
Sbjct 40592 CGAAGGCGGAGAACCAGGTGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGACAGGGTA 40533
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || || |||||||||||||| || ||||| ||||||||||||||||| ||| ||
Sbjct 40532 CGGCCGTCCTCCAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGAATACCC 40473
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| |||||| ||| || |||| |||||| | | ||| || || |
Sbjct 40472 TCCTTGTCCTGGATCTTTGACTTGACATTGTCGATGGTGTCGGAAGATTCCACCTCAAGG 40413
Query 199589 GTGATCGTCTTACCCGT 199605
||||| ||||| |||||
Sbjct 40412 GTGATAGTCTTGCCCGT 40396
Score = 129 bits (142), Expect = 1e-24
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | || || ||||| ||||| |||||||| |||| ||||||||||| || ||
Sbjct 40876 CGAAGGCGGAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTA 40817
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || || |||||||||||||| || ||||| |||||||||||||||||| ||| ||
Sbjct 40816 CGGCCGTCCTCCAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCCGGAGGAATGCCC 40757
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| ||| ||| || | ||| || | | || || || |
Sbjct 40756 TCCTTATCCTGGATCTTGGACTTGACGTTGTCAATGGTATCCGACGACTCGACTTCGAGA 40697
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCAC 199617
||||| ||||| || ||||| || || ||
Sbjct 40696 GTGATGGTCTTGCCGGTGAGGGTCTTGAC 40668
>seq335
Length=221524
Score = 127 bits (140), Expect = 5e-24
Identities = 148/199 (74%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 199430 AGAGTCGACT--CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCT 199487
|| || |||| |||| |||| ||||||||||| || ||| | ||||| ||||||||||
Sbjct 117037 AGCGTGGACTGACCTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCATCCTCCAGCTGCT 117096
Query 199488 TTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTT 199547
| || |||||||| ||||||||||||||||| ||| || || |||||||||||
Sbjct 117097 TGCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGG 117156
Query 199548 GCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGA 199607
||| || |||| ||||| | | || || || | || |||||||||||||| |
Sbjct 117157 ACTTGACATTGTCGATAGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTCA 117216
Query 199608 GAGTTTTCACAAAAATTTG 199626
| || || || ||||| ||
Sbjct 117217 GGGTCTTGACGAAAATCTG 117235
>seq1473
Length=183801
Score = 98.7 bits (108), Expect = 2e-15
Identities = 131/182 (72%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499
|||| || | ||||||||| | || || | ||||| || |||||||| || || ||||
Sbjct 105034 CCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGA 105093
Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559
| ||||||||||||||||| ||| || || ||||| ||||| ||| ||| |
Sbjct 105094 TCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 105153
Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619
||| ||||| | | || || |||| || || ||||||||||| || || || || |
Sbjct 105154 CGATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 105213
Query 199620 AA 199621
||
Sbjct 105214 AA 105215
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178886632080105
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |