Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq1092 356 2e-93
seq2283 122 9e-23
seq1473 96.9 3e-15
seq335 96.9 3e-15
>seq1092
Length=189081
Score = 356 bits (394), Expect = 2e-93
Identities = 592/846 (70%), Gaps = 17/846 (2%)
Strand=Plus/Plus
Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663
||||| || ||||| || ||||| || || || || || || | | || ||| |
Sbjct 136946 TTTTGGTAGTCGCCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGCGAGATGTTC 137005
Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACG 132720
||| || || |||||||||| | | |||| ||| | |||||| || ||||
Sbjct 137006 TCCATGAAGTCAAAGGGGTTGGTGGAGCGGTAGACCTTTTCGTTGCCGA---GGGCGACC 137062
Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGC 132780
||||| | |||||| || ||||| ||||| ||| ||| ||| || | || |||
Sbjct 137063 AGCAGACGGTCGGCAACAAACTCAATGTACTGCTTCATCAGGTCGGCGTTCATGCCGAGC 137122
Query 132781 AGA-CGCACCGGCAGCGCTTCGGTGA-GAAAGCGTTGCTCGATGGCGACCGCGTCGGTGA 132838
||| |||| ||||| || ||||| | ||| | || || |||||||| ||||||||||
Sbjct 137123 AGAGCGCAG-GGCAGGGCGTCGGTCAAGAACTCCTTT-TCAATGGCGACAGCGTCGGTGA 137180
Query 132839 CGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAG 132898
||||||| || || | ||| || || | | ||| ||| | || ||| |
Sbjct 137181 TGATTTCCTCAATCAGCTTCTTGCTGGGGCGGTTGTTGAGGTGCGAGAAGAGCAGGCAGG 137240
Query 132899 CAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGG 132958
||||||| |||| ||||||||| | |||||| || |||||| || |||| |||||
Sbjct 137241 CAAAGTCTGTGTGCAGGCCCTCGTCGCGGGAAATCAGCTCGTTGGAAAAGGTCAGGCCGG 137300
Query 132959 GCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGC 133018
||||||| ||||| || |||||||| |||| || || |||||| ||||||| ||
Sbjct 137301 GCATGAGACCGCGCTTGCGCAGCCAAAAGATGGAAGCAAAGGCGCCCGAGAAGAAGATGC 137360
Query 133019 CCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCC 133078
| |||||||| || || |||||||| || | | | || || | || | | ||| ||||
Sbjct 137361 CTTCGACGGCGGCAAAGGCCACCAGACGTTGGGCAAAGGTCGACTCGTGGTCGGCAATCC 137420
Query 133079 AGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACA 133138
| || ||||| |||||||| || ||| || || || || |||||||| |||
Sbjct 137421 ACTTGAGGGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTATCAATGGCGTTAAAC- 137479
Query 133139 AACGGAGTTTCTCTTCCGAGGAAC--GCACGTAGGTGTCGATGAGGGTCGAATACATTTC 133196
| | || | | || || | | ||| ||||| || || ||| || | ||
Sbjct 137480 -AGGTAGCTGCGCTGGGCGGGCTCCTTGATGTACGTGTCAATCAGCAGCGAGTATGTCTC 137538
Query 133197 CGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTG 133256
||||| | ||||||||| ||| ||||||||||| ||||| || |||||| | |||
Sbjct 137539 GGAGTGGATGTTCTCCATCATGATCTGAAAGCCGTAGAAGCAGCGGGCCTCGGGGATCTG 137598
Query 133257 CACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAA 133316
|| || | ||| ||||||||||| || |||||||| |||||||| ||||| ||
Sbjct 137599 GACCTCGCCCGAGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGACGCGGCAAA 137658
Query 133317 AAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAGTC 133373
||||||||||||||| |||||| | |||| | ||||| ||| | ||||||
Sbjct 137659 GAAGGCCAGCACGTGCGAGATGAAGTACTTTTCGTCCTTGTTCATGCGGTTGTTCCAGTC 137718
Query 133374 GCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTT 133433
| || ||||||||||||||| | ||||||| | ||||| || ||||||||||| |||||
Sbjct 137719 GTGCAGGTCCTTGGACAGGTCAATCTCCTCGGCAGTCCAGAAGGACGCCTCGGCCTTTTT 137778
Query 133434 GTACAT 133439
||||||
Sbjct 137779 GTACAT 137784
>seq2283
Length=86879
Score = 122 bits (134), Expect = 9e-23
Identities = 158/216 (73%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || ||||| |||||||| |||| |||||| | |
Sbjct 40884 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACCATCACTCTCGAAGTCGAGTCGTCG 40943
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | | |||| | || || |||| ||||| ||||| |||||| | |||||
Sbjct 40944 GATACCATTGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCA 41002
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || |||| |||||| || |||||||| || | || ||||| ||||||||
Sbjct 41003 GCAGCGTCTGATTTTCGCGGGTAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAA 41062
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||||| ||||| | || || || |||| || ||
Sbjct 41063 CATCCAGAAGGAGTCTACTCTTCACCTGGTTCTCCG 41098
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || ||||| || ||||| | || || || || ||
Sbjct 41112 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACAATCACTCTTGAGGTGGAATCCTCC 41171
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | | | | || || |||| || || ||||| ||||| | |||||
Sbjct 41172 GATACCATCGACAATGTGAAGTCGAAGATCCAGGATAAGGAGGGCATTCCTCCGGACCAG 41231
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || |||| |||||| || |||||||| || | || ||||| ||||||||||
Sbjct 41232 CAGCGCCTGATTTTCGCGGGTAAGCAGCTGGAGGATGGCCGTACCCTGTCCGACTACAAC 41291
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472
||||| ||||| | || || || |||| |||||| || | |||||||
Sbjct 41292 ATCCAGAAGGAGTCCACCCTCCACCTGGTTCTGCGTCTGCGTGGCGGCC 41340
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 38250 ATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGC 38309
||| |||| || || ||||| ||||| |||||||| |||| |||||| | | || | |
Sbjct 40662 ATAGTCGTCAAGACCCTCACCGGCAAGACCATCACTCTCGAAGTCGAGTCGTCGGATACC 40721
Query 38310 GTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCG 38368
| | |||| | || || |||| || || ||||| ||||| | ||||| |||||
Sbjct 40722 ATTGACAACG-TCAAGTCCAAGATCCAGGATAAGGAGGGCATTCCTCCGGACCAGCAGCG 40780
Query 38369 GCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCA 38428
|| || | || || || |||||||| |||| || ||||| ||||||||||||||
Sbjct 40781 TCTGATCTTTGCTGGAAAGCAGCTGGAGGACGGCCGTACCCTGTCTGACTACAACATCCA 40840
Query 38429 AAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||| | || || || |||| || ||
Sbjct 40841 GAAGGAGTCTACTCTTCACCTGGTTCTCCG 40870
>seq1473
Length=183801
Score = 96.9 bits (106), Expect = 3e-15
Identities = 132/182 (73%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || || ||||| || ||||| ||| | || |||||| || | |||| |
Sbjct 105214 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTGGAGGTCGAGTCCTCGGACACGATC 105155
Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371
| |||| | || || |||| ||||| ||||| |||||| | ||||| ||||| ||
Sbjct 105154 GACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCT 105096
Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431
|| | || ||||| ||||| || || | |||||||| |||||||||||| || ||
Sbjct 105095 GATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGTCCGACTACAACATTCAGAA 105036
Query 38432 GG 38433
||
Sbjct 105035 GG 105034
>seq335
Length=221524
Score = 96.9 bits (106), Expect = 3e-15
Identities = 137/193 (71%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || ||||| || || || ||||| || || || ||| |||| || ||| ||
Sbjct 117241 AAGATGCAGATTTTCGTCAAGACCCTGACGGGTAAGACGATTACCCTCGAGGTTGAGTCC 117182
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
| |||| | | | | || || || | ||||| ||||| |||||| | |||
Sbjct 117181 TCGGACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGAC 117122
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| ||||| || || | ||| ||||| |||||||| || | ||||| || ||||||
Sbjct 117121 CAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCTGACTAC 117062
Query 38421 AACATCCAAAAGG 38433
|||||||| ||||
Sbjct 117061 AACATCCAGAAGG 117049
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500158326249600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |