Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1750 237 2e-57 seq1654 95.1 2e-14 seq1092 86.0 8e-12 >seq1750 Length=138661 Score = 237 bits (262), Expect = 2e-57 Identities = 1077/1690 (64%), Gaps = 43/1690 (3%) Strand=Plus/Plus Query 111711 CACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTC 111770 ||||| | || || || |||||||||||||| || |||| |||| ||| || Sbjct 35170 CACGCCTCGCCCACTCTGTTCAACGCTGGTACTCCTCAGGCCCAGCTGTCATCTTGCTTT 35229 Query 111771 CTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCC 111830 || ||| | |||||||| || || | |||||||||| ||||||| ||||| Sbjct 35230 CTGGTTGACATGAAGGAGGACTCGATTGAAGGCATTTACGATACTCTCAAGACTTGTGCT 35289 Query 111831 CAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAG 111890 || || ||| ||||||||||||||| | | | || | || | |||| | Sbjct 35290 ATGATTTCCAAGATGGCTGGTGGTATCGGCCTCAATGTTCACCGTATCCGCGCCACT--G 35347 Query 111891 TCTCGTA--TTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTAT 111948 |||||| || ||||| || ||| || | || ||||| || ||||| ||||| | Sbjct 35348 GCTCGTACATTGCTGGTACCAACGGTACCTCCAACGGCATTATCCCCATGCTGCGCGTGT 35407 Query 111949 TTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTCG-CAAG------GGATCTATC 112001 | ||| ||| || |||||||| |||| ||||| | |||| || || | Sbjct 35408 TCAACAACACTGCCCGCTATGTCGACCA----GGGCGGCAACAAGCGCCCTGGTGCTTTT 35463 Query 112002 GCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAAC 112061 || | || || ||||| |||||||| ||| | | ||||||||||| |||| || Sbjct 35464 GCCATTTACCTGGAGCCGTGGCACGCCGATGTGTTTGAGTTCCTTGACCTGCGCAAGAAT 35523 Query 112062 CAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTC 112121 || ||| | ||||||| || ||| || || ||| ||||| |||||||| || | Sbjct 35524 CATGGTAAGGAGGAGGTCCGCGCCCGTGACCTGTTCCTAGCTCTGTGGATTCCCGACATG 35583 Query 112122 TTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCC 112181 ||||||||| | || ||| ||| | || ||| | || | ||||| || || || Sbjct 35584 TTCATGAAGCGTGTCGAGAAGAACGAGAACTGGACCCTGATGTGTCCCAACGAGTGCCCT 35643 Query 112182 GGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAA 112241 || || | || | || ||||| ||||| || || ||| ||||||||| |||| | Sbjct 35644 GGCCTGGCTGACTGCTACGGCGAGGAATTTGAGGCTCTGTACGAAAAGTACGA-GAAGGA 35702 Query 112242 AGTCGGGCGACTGC-GACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTC 112299 | | | | | || | |||| | || | || | ||||| | || ||| | || | | Sbjct 35703 GGGCCGTGGTCGGCAGTCGGT-CAAGGCCCAGAAGCTGTGGTATGCCATTTTGGAGGCCC 35761 Query 112300 AAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATC 112359 | ||||||||||| | || | |||||| ||||| ||| ||| |||| ||||| || | Sbjct 35762 AGACCGAGACTGGCAACCCGTTTATGCTGTACAAGGACCACTGCAACCGCAAGAGCAACC 35821 Query 112360 AAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAG 112419 |||||||| ||||| || || |||||||| || || || || | || | | Sbjct 35822 AAAAGAATCTGGGTACCATTCGCAGCTCCAACCTGTGCACTGAGATTATCGAGTACTGTG 35881 Query 112420 ACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-T 112478 | |||||| |||||||| ||||| || || | || || || || ||| || | Sbjct 35882 CCCCTGATGAGGTTGCTGTGTGCAACCTGGCCTCGCTGGCGCTGCCATCGTTTGTTGACT 35941 Query 112479 CCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAA 112538 ||| || || | | || | | || || ||||| || || || || Sbjct 35942 ACAGCGAGAACCGC-TACGACTTCCAGAAGCTGCACGATGTCACCAAGGTGGTGGTGCGC 36000 Query 112539 AACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCT 112595 || || ||| | | |||||| ||| ||||| || ||| || | || Sbjct 36001 AATCTGAACCGCATCATTGATGTCAATCACTACCCTGTGCCCGAG---GCACACAACAGC 36057 Query 112596 AATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTT 112655 || ||| | |||||||| ||||| | |||||||| ||||| || |||| || || Sbjct 36058 AACATGCGCCACCGTCCTATTGGCGTTGGTGTCCAGGGTCTGGCTGATGCCTT-----TT 36112 Query 112656 TGTCGCCACG-----CATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTG 112710 || | | ||| | ||||| || | ||| || | |||| | | || |||| Sbjct 36113 TGGCTCTACGTATGCCGTTTGAGTCGGCCGAGGCTCGCAAGCTCAACACTCAGATCTTTG 36172 Query 112711 AGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCAT 112770 |||| || || ||||| || || |||| |||| | || ||| || || | | Sbjct 36173 AGACTATTTACCACGCTGCCCTGACGGCGTCCATGGAGATTGCCAAGGAGGAGGGCACGT 36232 Query 112771 ATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAG 112830 | |||| |||||||| || | ||| || || | || || ||||| |||| |||| Sbjct 36233 ACTCGACCTACGAGGGTTCGCCTGTTTCGCAGGGCATCCTGCAGTTTGACATGT-GGAAT 36291 Query 112831 GTGAGACCAAG-CTTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGT 112889 || | || || | || ||||||| | |||||||| | |||||| || | ||| Sbjct 36292 GTCACTCCCAGTGACCTCTGGGACTGGGCTTCGCTCAAGGAGCAGATCAAGCAGCACGGT 36351 Query 112890 CTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGT 112949 | || ||| || || |||| || ||||| || ||| ||| | || || |||| Sbjct 36352 GTGCGCAACTCGCTGCTGCTGGCTCCCATGCCTACGGCCAGCACGTCGCAGATTCTGGGC 36411 Query 112950 AATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGA 113009 || ||||| |||||||| || ||||| | ||||| || | | | | || || || Sbjct 36412 AACAATGAGTGCTTTGAGCCGTACACTTCCAACATTTACCAGCGTCGTGTGCTTGCCGGT 36471 Query 113010 GAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCC 113069 ||||| | |||| ||| | || || |||||| || | ||||| ||||| Sbjct 36472 GAGTTCCAGGTTGTGAACCCGTGGCTGCTGCGTGACCTGGTTGACCTGGGTCTGTGGTCT 36531 Query 113070 AAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATT 113129 | | |||||| | | ||| | | | ||||| ||||| || ||| ||| Sbjct 36532 GATAACATGAAGAACCGCATTATTGCCGAGAACGGTTCTATTCAGAACATTCCCAGCATT 36591 Query 113130 CCAGATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATT 113189 || || || || ||| ||||| ||||| ||||| || | | || | Sbjct 36592 CCCGACGACATCAAGGCTCTGTACAAGACAGTGTGGGAGATTTCGCAGCGCACGGTGGTG 36651 Query 113190 GACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCA 113247 | ||||| || || |||||| ||| || || | |||| ||| | || | || Sbjct 36652 CAGATGGCTGCCGACCGTGGTGCCTTTATCGACC--AGTCGCAGTCGCTCAACATTCACA 36709 Query 113248 TGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTC 113307 || | || || ||| |||| | | |||||| | | | |||||| ||||| Sbjct 36710 TGAAGGACCCTACCATGGGCAAGATTACCAGCATGCACTTTGCCGGCTGGAAGCTGGGTC 36769 Query 113308 TCAAAACGGGGATGTATTACCTCCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCAGTC 113367 |||| ||||| ||||| ||||| || || |||| ||| || |||||||| | | Sbjct 36770 TCAAGACGGGCATGTACTACCTGCGTACTCAGGCTGCTGCGGCGCCTATTCAGTTTACTG 36829 Query 113368 TTGAACCAGA 113377 |||| | ||| Sbjct 36830 TTGACCAAGA 36839 >seq1654 Length=5849 Score = 95.1 bits (104), Expect = 2e-14 Identities = 158/226 (70%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 16064 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 16123 ||| |||||||| ||||| |||| |||||| || ||| | ||| || |||| || Sbjct 1858 GGCGTCAATCTCGTCAATAAAGATGATGCACGGCGCATTCTTGCGTGCCGTGGCAAACAG 1799 Query 16124 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG-GAAC 16182 ||||| || ||| | ||| ||||| ||||||||||| ||||| | | | || || Sbjct 1798 GTCCCGCACCCGCGATGGGCCAACACCTACAAACATCTCGACAAACTCGGAGCCGCTGAC 1739 Query 16183 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 16242 | || ||| || || || || || || |||| ||| || || ||||| |||| Sbjct 1738 GCT-GAAGAACGGCACGCCCGACTCGCCTGCCGTGGCCTTGGCCAGCAGCGTCTTTCCCG 1680 Query 16243 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288 | || || ||||| || | |||||| ||||| ||||||||||| Sbjct 1679 TTCCGGGAGGACCCGACAGAATGGCACCGCGTGGGATCTTGGCGCC 1634 >seq1092 Length=189081 Score = 86.0 bits (94), Expect = 8e-12 Identities = 117/161 (73%), Gaps = 2/161 (1%) Strand=Plus/Minus Query 102172 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 102231 ||||||| | || || | || ||||| || || || ||||||||||| || ||| Sbjct 137399 CCTTTGCCCAACGTCTGGTGGCCTTTGCCGCCGTCGAAGGCATCTTCTTCTCGGGCGCCT 137340 Query 102232 TCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 | ||| | || | |||||| ||||| ||||||||||| || || ||| |||||| Sbjct 137339 T-TGCTTCCATCTTTTGGCTGCGCAAGCGCGGTCTCATGCCCGGCCTGACCTTTTCCAAC 137281 Query 102291 GAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||||| || || || |||||||| || ||| ||| ||||| Sbjct 137280 GAGCTGATTTCCCGCGACGAGGGCCTGCACACAGACTTTGC 137240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620724437266800