Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq1750 237 2e-57
seq1654 95.1 2e-14
seq1092 86.0 8e-12
>seq1750
Length=138661
Score = 237 bits (262), Expect = 2e-57
Identities = 1077/1690 (64%), Gaps = 43/1690 (3%)
Strand=Plus/Plus
Query 111711 CACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTC 111770
||||| | || || || |||||||||||||| || |||| |||| ||| ||
Sbjct 35170 CACGCCTCGCCCACTCTGTTCAACGCTGGTACTCCTCAGGCCCAGCTGTCATCTTGCTTT 35229
Query 111771 CTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCC 111830
|| ||| | |||||||| || || | |||||||||| ||||||| |||||
Sbjct 35230 CTGGTTGACATGAAGGAGGACTCGATTGAAGGCATTTACGATACTCTCAAGACTTGTGCT 35289
Query 111831 CAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAG 111890
|| || ||| ||||||||||||||| | | | || | || | |||| |
Sbjct 35290 ATGATTTCCAAGATGGCTGGTGGTATCGGCCTCAATGTTCACCGTATCCGCGCCACT--G 35347
Query 111891 TCTCGTA--TTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTAT 111948
|||||| || ||||| || ||| || | || ||||| || ||||| ||||| |
Sbjct 35348 GCTCGTACATTGCTGGTACCAACGGTACCTCCAACGGCATTATCCCCATGCTGCGCGTGT 35407
Query 111949 TTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTCG-CAAG------GGATCTATC 112001
| ||| ||| || |||||||| |||| ||||| | |||| || || |
Sbjct 35408 TCAACAACACTGCCCGCTATGTCGACCA----GGGCGGCAACAAGCGCCCTGGTGCTTTT 35463
Query 112002 GCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAAC 112061
|| | || || ||||| |||||||| ||| | | ||||||||||| |||| ||
Sbjct 35464 GCCATTTACCTGGAGCCGTGGCACGCCGATGTGTTTGAGTTCCTTGACCTGCGCAAGAAT 35523
Query 112062 CAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTC 112121
|| ||| | ||||||| || ||| || || ||| ||||| |||||||| || |
Sbjct 35524 CATGGTAAGGAGGAGGTCCGCGCCCGTGACCTGTTCCTAGCTCTGTGGATTCCCGACATG 35583
Query 112122 TTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCC 112181
||||||||| | || ||| ||| | || ||| | || | ||||| || || ||
Sbjct 35584 TTCATGAAGCGTGTCGAGAAGAACGAGAACTGGACCCTGATGTGTCCCAACGAGTGCCCT 35643
Query 112182 GGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAA 112241
|| || | || | || ||||| ||||| || || ||| ||||||||| |||| |
Sbjct 35644 GGCCTGGCTGACTGCTACGGCGAGGAATTTGAGGCTCTGTACGAAAAGTACGA-GAAGGA 35702
Query 112242 AGTCGGGCGACTGC-GACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTC 112299
| | | | | || | |||| | || | || | ||||| | || ||| | || | |
Sbjct 35703 GGGCCGTGGTCGGCAGTCGGT-CAAGGCCCAGAAGCTGTGGTATGCCATTTTGGAGGCCC 35761
Query 112300 AAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATC 112359
| ||||||||||| | || | |||||| ||||| ||| ||| |||| ||||| || |
Sbjct 35762 AGACCGAGACTGGCAACCCGTTTATGCTGTACAAGGACCACTGCAACCGCAAGAGCAACC 35821
Query 112360 AAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAG 112419
|||||||| ||||| || || |||||||| || || || || | || | |
Sbjct 35822 AAAAGAATCTGGGTACCATTCGCAGCTCCAACCTGTGCACTGAGATTATCGAGTACTGTG 35881
Query 112420 ACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-T 112478
| |||||| |||||||| ||||| || || | || || || || ||| || |
Sbjct 35882 CCCCTGATGAGGTTGCTGTGTGCAACCTGGCCTCGCTGGCGCTGCCATCGTTTGTTGACT 35941
Query 112479 CCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAA 112538
||| || || | | || | | || || ||||| || || || ||
Sbjct 35942 ACAGCGAGAACCGC-TACGACTTCCAGAAGCTGCACGATGTCACCAAGGTGGTGGTGCGC 36000
Query 112539 AACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCT 112595
|| || ||| | | |||||| ||| ||||| || ||| || | ||
Sbjct 36001 AATCTGAACCGCATCATTGATGTCAATCACTACCCTGTGCCCGAG---GCACACAACAGC 36057
Query 112596 AATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTT 112655
|| ||| | |||||||| ||||| | |||||||| ||||| || |||| || ||
Sbjct 36058 AACATGCGCCACCGTCCTATTGGCGTTGGTGTCCAGGGTCTGGCTGATGCCTT-----TT 36112
Query 112656 TGTCGCCACG-----CATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTG 112710
|| | | ||| | ||||| || | ||| || | |||| | | || ||||
Sbjct 36113 TGGCTCTACGTATGCCGTTTGAGTCGGCCGAGGCTCGCAAGCTCAACACTCAGATCTTTG 36172
Query 112711 AGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCAT 112770
|||| || || ||||| || || |||| |||| | || ||| || || | |
Sbjct 36173 AGACTATTTACCACGCTGCCCTGACGGCGTCCATGGAGATTGCCAAGGAGGAGGGCACGT 36232
Query 112771 ATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAG 112830
| |||| |||||||| || | ||| || || | || || ||||| |||| ||||
Sbjct 36233 ACTCGACCTACGAGGGTTCGCCTGTTTCGCAGGGCATCCTGCAGTTTGACATGT-GGAAT 36291
Query 112831 GTGAGACCAAG-CTTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGT 112889
|| | || || | || ||||||| | |||||||| | |||||| || | |||
Sbjct 36292 GTCACTCCCAGTGACCTCTGGGACTGGGCTTCGCTCAAGGAGCAGATCAAGCAGCACGGT 36351
Query 112890 CTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGT 112949
| || ||| || || |||| || ||||| || ||| ||| | || || ||||
Sbjct 36352 GTGCGCAACTCGCTGCTGCTGGCTCCCATGCCTACGGCCAGCACGTCGCAGATTCTGGGC 36411
Query 112950 AATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGA 113009
|| ||||| |||||||| || ||||| | ||||| || | | | | || || ||
Sbjct 36412 AACAATGAGTGCTTTGAGCCGTACACTTCCAACATTTACCAGCGTCGTGTGCTTGCCGGT 36471
Query 113010 GAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCC 113069
||||| | |||| ||| | || || |||||| || | ||||| |||||
Sbjct 36472 GAGTTCCAGGTTGTGAACCCGTGGCTGCTGCGTGACCTGGTTGACCTGGGTCTGTGGTCT 36531
Query 113070 AAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATT 113129
| | |||||| | | ||| | | | ||||| ||||| || ||| |||
Sbjct 36532 GATAACATGAAGAACCGCATTATTGCCGAGAACGGTTCTATTCAGAACATTCCCAGCATT 36591
Query 113130 CCAGATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATT 113189
|| || || || ||| ||||| ||||| ||||| || | | || |
Sbjct 36592 CCCGACGACATCAAGGCTCTGTACAAGACAGTGTGGGAGATTTCGCAGCGCACGGTGGTG 36651
Query 113190 GACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCA 113247
| ||||| || || |||||| ||| || || | |||| ||| | || | ||
Sbjct 36652 CAGATGGCTGCCGACCGTGGTGCCTTTATCGACC--AGTCGCAGTCGCTCAACATTCACA 36709
Query 113248 TGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTC 113307
|| | || || ||| |||| | | |||||| | | | |||||| |||||
Sbjct 36710 TGAAGGACCCTACCATGGGCAAGATTACCAGCATGCACTTTGCCGGCTGGAAGCTGGGTC 36769
Query 113308 TCAAAACGGGGATGTATTACCTCCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCAGTC 113367
|||| ||||| ||||| ||||| || || |||| ||| || |||||||| | |
Sbjct 36770 TCAAGACGGGCATGTACTACCTGCGTACTCAGGCTGCTGCGGCGCCTATTCAGTTTACTG 36829
Query 113368 TTGAACCAGA 113377
|||| | |||
Sbjct 36830 TTGACCAAGA 36839
>seq1654
Length=5849
Score = 95.1 bits (104), Expect = 2e-14
Identities = 158/226 (70%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 16064 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 16123
||| |||||||| ||||| |||| |||||| || ||| | ||| || |||| ||
Sbjct 1858 GGCGTCAATCTCGTCAATAAAGATGATGCACGGCGCATTCTTGCGTGCCGTGGCAAACAG 1799
Query 16124 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG-GAAC 16182
||||| || ||| | ||| ||||| ||||||||||| ||||| | | | || ||
Sbjct 1798 GTCCCGCACCCGCGATGGGCCAACACCTACAAACATCTCGACAAACTCGGAGCCGCTGAC 1739
Query 16183 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 16242
| || ||| || || || || || || |||| ||| || || ||||| ||||
Sbjct 1738 GCT-GAAGAACGGCACGCCCGACTCGCCTGCCGTGGCCTTGGCCAGCAGCGTCTTTCCCG 1680
Query 16243 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288
| || || ||||| || | |||||| ||||| |||||||||||
Sbjct 1679 TTCCGGGAGGACCCGACAGAATGGCACCGCGTGGGATCTTGGCGCC 1634
>seq1092
Length=189081
Score = 86.0 bits (94), Expect = 8e-12
Identities = 117/161 (73%), Gaps = 2/161 (1%)
Strand=Plus/Minus
Query 102172 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 102231
||||||| | || || | || ||||| || || || ||||||||||| || |||
Sbjct 137399 CCTTTGCCCAACGTCTGGTGGCCTTTGCCGCCGTCGAAGGCATCTTCTTCTCGGGCGCCT 137340
Query 102232 TCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290
| ||| | || | |||||| ||||| ||||||||||| || || ||| ||||||
Sbjct 137339 T-TGCTTCCATCTTTTGGCTGCGCAAGCGCGGTCTCATGCCCGGCCTGACCTTTTCCAAC 137281
Query 102291 GAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
||||| || || || |||||||| || ||| ||| |||||
Sbjct 137280 GAGCTGATTTCCCGCGACGAGGGCCTGCACACAGACTTTGC 137240
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620724437266800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |