Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1750 192 7e-44 seq1654 84.2 3e-11 >seq1750 Length=138661 Score = 192 bits (212), Expect = 7e-44 Identities = 896/1403 (64%), Gaps = 51/1403 (4%) Strand=Plus/Minus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 || ||||| | ||||| || |||||||| ||||| || |||| || || | ||| | Sbjct 36449 TAAATGTTGGAAGTGTACGGCTCAAAGCACTCATTGTTGCCCAGAATCTGCGACGTGCTG 36390 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 || || ||||| || |||| || || ||| || | ||| | | |||||| | ||| Sbjct 36389 GCCGTAGGCATGGGAGCCAGCAGCAGCGAGTTGCGCACACCGTGCTGCTTGATCTGCTCC 36330 Query 106055 TTGAGAACATCCCAGTCGTAGTTGAG-CTTGGTTTCACCTTCCCACATATCAAATTGAAG 106113 ||||| | ||||||| || | || || | || |||| |||| ||||| || || Sbjct 36329 TTGAGCGAAGCCCAGTCCCAGAGGTCACTGGGAGTGACATTCC-ACATGTCAAACTGCAG 36271 Query 106114 CACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAA 106173 | || || || || |||||||| | ||| || | || | | | || | Sbjct 36270 GATGCCCTGCGAAACAGGCGAACCCTCGTAGGTCGAGTACGTGCCCTCCTCCTTGGCAAT 36211 Query 106174 TTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTC 106233 || | |||| ||||| ||||| || || || |||||||| ||| || | || Sbjct 36210 CTCCATGGACGCCGTCAGGGCAGCGTGGTAAATAGTCTCAAAGATCTGAGTGTTGAGCTT 36151 Query 106234 CTTGGCTTCATCTGAATCAAATG-----CGTAGCGGCACAAAATAAATACATCCGCGAGA 106288 || || | || ||||| | ||||| | || ||| |||| || ||| Sbjct 36150 GCGAGCCTCGGCCGACTCAAACGGCATACGTAGAGCCAAAAAGG-----CATCAGCCAGA 36096 Query 106289 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA--- 106345 || || ||||| | |||||||| | ||| ||||| || || | || ||| Sbjct 36095 CCCTGGACACCAACGCCAATAGGACGGTGGCGCATGTTGCTGTTGTGTGC---CTCGGGC 36039 Query 106346 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT 106405 || || || ||| ||||||| ||||| ||||| || | ||| |||| Sbjct 36038 ACAGGGTAGTGATTGACATCAATGATGCGGTTCAGATTGCGCACCACCACCTTGGTGACA 35979 Query 106406 TCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTG---ACATACTTTGGAAGG 106462 || || || || | | || | ||| |||| | | ||| || ||| || Sbjct 35978 TCGTGCAGCTTCTGGAAGTCGTA---GCGGTTCTCGCTGTAGTCAACAAACGATGGCAGC 35922 Query 106463 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 106522 || | || |||| ||||| ||||| |||||| | |||||| | ||| || Sbjct 35921 GCCAGCGAGGCCAGGTTGCACACAGCAACCTCATCAGGGGCACAGTACTCGATAATCTCA 35862 Query 106523 GTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCAC 106582 || |||| |||||| || ||| || |||| |||||||||||| ||||| |||||| Sbjct 35861 GTGCACAGGTTGGAGCTGCGAATGGTACCCAGATTCTTTTGGTTGCTCTTGCGGTTGCAG 35802 Query 106583 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTC 106642 |||||||| ||||| | || | || ||||| ||||| | || | ||| || | | Sbjct 35801 TGGTCCTTGTACAGCATAAACGGGTTGCCAGTCTCGGTCTGGGCCTCCAAAATGGCATAC 35742 Query 106643 CACA-CATCGGCGGCTGGTAC-AATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGT 106700 |||| | || | | || | | | || || | || |||||| |||||||||| || Sbjct 35741 CACAGCTTCTGGGCCTTGACCGACTGCCG--ACCACGGCCCTCCTTCTCGTACTTTTCGT 35684 Query 106701 AGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGA 106760 | || || ||||| ||||| || ||| | || || || || || ||||| | Sbjct 35683 ACAGAGCCTCAAATTCCTCGCCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGACACA 35624 Query 106761 AAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG 106820 || | ||| | | || ||| || ||||||||||| | ||| ||||||||||| | Sbjct 35623 TCAGGGTCCAGTTCTCGTTCTTCTCGACACGCTTCATGAACATGTCGGGAATCCACAGAG 35564 Query 106821 ATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGA 106880 | || || || | || |||| || | ||| || || || | ||||||| Sbjct 35563 CTAGGAACAGGTCACGGGCGCGGACCTCCTCCTTACCATGATTCTTGCGCAGGTCAAGGA 35504 Query 106881 ACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC------CTT-T 106933 |||| | | ||| |||||||| ||||| || || | || | || || ||| | Sbjct 35503 ACTCAAACACATCGGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACCAGGGCGCTTGT 35444 Query 106934 CGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATA 106993 | ||||| || | |||||||| || ||| ||| || ||||| ||||| || ||| Sbjct 35443 TGCCGCCC----TGGTCGACATAGCGGGCAGTGTTGTTGAACACGCGCAGCATGGGGATA 35388 Query 106994 ATACCATCTGATTGACCATTTGTCCCCCGAA--TACGAGATTTATTGGCTCTCACATCAT 107051 || || | || ||| || || || || |||||| | |||| | | | | Sbjct 35387 ATGCCGTTGGAGGTACCGTTGGTACCAGCAATGTACGAG--CCAGTGGCGCGGATACGGT 35330 Query 107052 GGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTC 107111 | | | | || ||||| |||||| ||| || || ||||| | | ||||| Sbjct 35329 GAACATTGAGGCCGATACCACCAGCCATCTTGGAAATCATAGCACAAGTCTTGAGAGTAT 35270 Query 107112 CATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCG 107171 | || || || | || ||||||||||| || | | || |||||| |||| ||| | Sbjct 35269 CGTAAATGCCTTCAATCGAGTCCTCCTTCATGTCAACCAGAAAGCAAGATGACAGCTG-G 35211 Query 107172 GTCT-TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GG 107228 | || || |||||||| ||||| || || || | |||||| | | | | |||| | Sbjct 35210 GCCTGAGGAGTACCAGCGTTGAACAGAGTGGGCGAGGCGTGA--GTAAAGAACTTGCTCG 35153 Query 107229 ACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCT-TCCCCGTGGATGCCGATGGCC 107287 |||| || ||| ||||| | ||| || | ||| || || |||||| | ||| Sbjct 35152 ACATGAGGTTGTACGTCTCAATGACGCGGTCGA-CTCTGTCACCCCAGATGCCAACAGCC 35094 Query 107288 ACACGCATAAACATGTATTGGGG 107310 |||||||||| ||||| ||||| Sbjct 35093 ACACGCATAATCATGTGCTGGGG 35071 >seq1654 Length=5849 Score = 84.2 bits (92), Expect = 3e-11 Identities = 213/320 (67%), Gaps = 8/320 (3%) Strand=Plus/Minus Query 9371 GGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAG 9430 ||| |||||||| ||||| |||| || || || ||| | ||| || | |||| || Sbjct 1858 GGCGTCAATCTCGTCAATAAAGATGATGCACGGCGCATTCTTGCGTGCCGTGGCAAACAG 1799 Query 9431 ATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG-GAAC 9489 || || |||| | ||| ||||| ||||||||||| ||||| | | | || || Sbjct 1798 GTCCCGCACCCGCGATGGGCCAACACCTACAAACATCTCGACAAACTCGGAGCCGCTGAC 1739 Query 9490 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9549 | || ||| || || || || || || |||| ||| || || ||||| |||| Sbjct 1738 GCT-GAAGAACGGCACGCCCGACTCGCCTGCCGTGGCCTTGGCCAGCAGCGTCTTTCCCG 1680 Query 9550 TACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC---ACTTCCAAAGT 9606 | || || ||||| || | |||||| ||||| ||||||||||| | |||| | Sbjct 1679 TTCCGGGAGGACCCGACAGAATGGCACCGCGTGGGATCTTGGCGCCCAGGCGCACAAACT 1620 Query 9607 ATCTCTCAGGTTGCTTGAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCGGCGTCAA 9666 |||| || | |||||| || | ||||| ||| | ||| | ||||| |||| | Sbjct 1619 ---TCTCGGGCTTCTTGAGGAACTGCACAAACTCCATGATTTCCACCTTGGCCTCGTCCA 1563 Query 9667 TCCCCTCAACATCGGTAAAC 9686 | || | || || | |||| Sbjct 1562 TGCCGGCCACGTCAGCAAAC 1543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589963727430600