Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq1750 192 7e-44
seq1654 84.2 3e-11
>seq1750
Length=138661
Score = 192 bits (212), Expect = 7e-44
Identities = 896/1403 (64%), Gaps = 51/1403 (4%)
Strand=Plus/Minus
Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994
|| ||||| | ||||| || |||||||| ||||| || |||| || || | ||| |
Sbjct 36449 TAAATGTTGGAAGTGTACGGCTCAAAGCACTCATTGTTGCCCAGAATCTGCGACGTGCTG 36390
Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054
|| || ||||| || |||| || || ||| || | ||| | | |||||| | |||
Sbjct 36389 GCCGTAGGCATGGGAGCCAGCAGCAGCGAGTTGCGCACACCGTGCTGCTTGATCTGCTCC 36330
Query 106055 TTGAGAACATCCCAGTCGTAGTTGAG-CTTGGTTTCACCTTCCCACATATCAAATTGAAG 106113
||||| | ||||||| || | || || | || |||| |||| ||||| || ||
Sbjct 36329 TTGAGCGAAGCCCAGTCCCAGAGGTCACTGGGAGTGACATTCC-ACATGTCAAACTGCAG 36271
Query 106114 CACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAA 106173
| || || || || |||||||| | ||| || | || | | | || |
Sbjct 36270 GATGCCCTGCGAAACAGGCGAACCCTCGTAGGTCGAGTACGTGCCCTCCTCCTTGGCAAT 36211
Query 106174 TTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTC 106233
|| | |||| ||||| ||||| || || || |||||||| ||| || | ||
Sbjct 36210 CTCCATGGACGCCGTCAGGGCAGCGTGGTAAATAGTCTCAAAGATCTGAGTGTTGAGCTT 36151
Query 106234 CTTGGCTTCATCTGAATCAAATG-----CGTAGCGGCACAAAATAAATACATCCGCGAGA 106288
|| || | || ||||| | ||||| | || ||| |||| || |||
Sbjct 36150 GCGAGCCTCGGCCGACTCAAACGGCATACGTAGAGCCAAAAAGG-----CATCAGCCAGA 36096
Query 106289 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA--- 106345
|| || ||||| | |||||||| | ||| ||||| || || | || |||
Sbjct 36095 CCCTGGACACCAACGCCAATAGGACGGTGGCGCATGTTGCTGTTGTGTGC---CTCGGGC 36039
Query 106346 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT 106405
|| || || ||| ||||||| ||||| ||||| || | ||| ||||
Sbjct 36038 ACAGGGTAGTGATTGACATCAATGATGCGGTTCAGATTGCGCACCACCACCTTGGTGACA 35979
Query 106406 TCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTG---ACATACTTTGGAAGG 106462
|| || || || | | || | ||| |||| | | ||| || ||| ||
Sbjct 35978 TCGTGCAGCTTCTGGAAGTCGTA---GCGGTTCTCGCTGTAGTCAACAAACGATGGCAGC 35922
Query 106463 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 106522
|| | || |||| ||||| ||||| |||||| | |||||| | ||| ||
Sbjct 35921 GCCAGCGAGGCCAGGTTGCACACAGCAACCTCATCAGGGGCACAGTACTCGATAATCTCA 35862
Query 106523 GTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCAC 106582
|| |||| |||||| || ||| || |||| |||||||||||| ||||| ||||||
Sbjct 35861 GTGCACAGGTTGGAGCTGCGAATGGTACCCAGATTCTTTTGGTTGCTCTTGCGGTTGCAG 35802
Query 106583 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTC 106642
|||||||| ||||| | || | || ||||| ||||| | || | ||| || | |
Sbjct 35801 TGGTCCTTGTACAGCATAAACGGGTTGCCAGTCTCGGTCTGGGCCTCCAAAATGGCATAC 35742
Query 106643 CACA-CATCGGCGGCTGGTAC-AATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGT 106700
|||| | || | | || | | | || || | || |||||| |||||||||| ||
Sbjct 35741 CACAGCTTCTGGGCCTTGACCGACTGCCG--ACCACGGCCCTCCTTCTCGTACTTTTCGT 35684
Query 106701 AGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGA 106760
| || || ||||| ||||| || ||| | || || || || || ||||| |
Sbjct 35683 ACAGAGCCTCAAATTCCTCGCCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGACACA 35624
Query 106761 AAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG 106820
|| | ||| | | || ||| || ||||||||||| | ||| ||||||||||| |
Sbjct 35623 TCAGGGTCCAGTTCTCGTTCTTCTCGACACGCTTCATGAACATGTCGGGAATCCACAGAG 35564
Query 106821 ATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGA 106880
| || || || | || |||| || | ||| || || || | |||||||
Sbjct 35563 CTAGGAACAGGTCACGGGCGCGGACCTCCTCCTTACCATGATTCTTGCGCAGGTCAAGGA 35504
Query 106881 ACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC------CTT-T 106933
|||| | | ||| |||||||| ||||| || || | || | || || ||| |
Sbjct 35503 ACTCAAACACATCGGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACCAGGGCGCTTGT 35444
Query 106934 CGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATA 106993
| ||||| || | |||||||| || ||| ||| || ||||| ||||| || |||
Sbjct 35443 TGCCGCCC----TGGTCGACATAGCGGGCAGTGTTGTTGAACACGCGCAGCATGGGGATA 35388
Query 106994 ATACCATCTGATTGACCATTTGTCCCCCGAA--TACGAGATTTATTGGCTCTCACATCAT 107051
|| || | || ||| || || || || |||||| | |||| | | | |
Sbjct 35387 ATGCCGTTGGAGGTACCGTTGGTACCAGCAATGTACGAG--CCAGTGGCGCGGATACGGT 35330
Query 107052 GGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTC 107111
| | | | || ||||| |||||| ||| || || ||||| | | |||||
Sbjct 35329 GAACATTGAGGCCGATACCACCAGCCATCTTGGAAATCATAGCACAAGTCTTGAGAGTAT 35270
Query 107112 CATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCG 107171
| || || || | || ||||||||||| || | | || |||||| |||| ||| |
Sbjct 35269 CGTAAATGCCTTCAATCGAGTCCTCCTTCATGTCAACCAGAAAGCAAGATGACAGCTG-G 35211
Query 107172 GTCT-TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GG 107228
| || || |||||||| ||||| || || || | |||||| | | | | |||| |
Sbjct 35210 GCCTGAGGAGTACCAGCGTTGAACAGAGTGGGCGAGGCGTGA--GTAAAGAACTTGCTCG 35153
Query 107229 ACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCT-TCCCCGTGGATGCCGATGGCC 107287
|||| || ||| ||||| | ||| || | ||| || || |||||| | |||
Sbjct 35152 ACATGAGGTTGTACGTCTCAATGACGCGGTCGA-CTCTGTCACCCCAGATGCCAACAGCC 35094
Query 107288 ACACGCATAAACATGTATTGGGG 107310
|||||||||| ||||| |||||
Sbjct 35093 ACACGCATAATCATGTGCTGGGG 35071
>seq1654
Length=5849
Score = 84.2 bits (92), Expect = 3e-11
Identities = 213/320 (67%), Gaps = 8/320 (3%)
Strand=Plus/Minus
Query 9371 GGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAG 9430
||| |||||||| ||||| |||| || || || ||| | ||| || | |||| ||
Sbjct 1858 GGCGTCAATCTCGTCAATAAAGATGATGCACGGCGCATTCTTGCGTGCCGTGGCAAACAG 1799
Query 9431 ATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG-GAAC 9489
|| || |||| | ||| ||||| ||||||||||| ||||| | | | || ||
Sbjct 1798 GTCCCGCACCCGCGATGGGCCAACACCTACAAACATCTCGACAAACTCGGAGCCGCTGAC 1739
Query 9490 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9549
| || ||| || || || || || || |||| ||| || || ||||| ||||
Sbjct 1738 GCT-GAAGAACGGCACGCCCGACTCGCCTGCCGTGGCCTTGGCCAGCAGCGTCTTTCCCG 1680
Query 9550 TACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC---ACTTCCAAAGT 9606
| || || ||||| || | |||||| ||||| ||||||||||| | |||| |
Sbjct 1679 TTCCGGGAGGACCCGACAGAATGGCACCGCGTGGGATCTTGGCGCCCAGGCGCACAAACT 1620
Query 9607 ATCTCTCAGGTTGCTTGAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCGGCGTCAA 9666
|||| || | |||||| || | ||||| ||| | ||| | ||||| |||| |
Sbjct 1619 ---TCTCGGGCTTCTTGAGGAACTGCACAAACTCCATGATTTCCACCTTGGCCTCGTCCA 1563
Query 9667 TCCCCTCAACATCGGTAAAC 9686
| || | || || | ||||
Sbjct 1562 TGCCGGCCACGTCAGCAAAC 1543
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589963727430600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |