Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq2283 140 7e-28
>seq2283
Length=86879
Score = 140 bits (154), Expect = 7e-28
Identities = 157/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
||| ||||||||||| ||||| || || || ||||| || | || || | ||||| ||
Sbjct 41093 AACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTC 41034
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
||||||||||| ||||| || || || || ||||| || ||||| || || ||||| ||
Sbjct 41033 CAGCTGCTTACCCGCGAAAATCAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTG 40974
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
|| || ||||||||| |||||||| ||||| || ||||| || || | |||||
Sbjct 40973 GATCTTGGACTTGACGTTGTCAATGGTATCCGACGACTCGACTTCGAGAGTGATGGTCTT 40914
Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | ||| || ||||| | ||||||
Sbjct 40913 GCCGGTAAGAGTCTTGACGAAGATTTGCAT 40884
Score = 136 bits (150), Expect = 9e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987
|| ||| ||||| || |||||||| || || || ||||| |||| || || | |||||
Sbjct 41324 CAGAACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATC 41265
Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047
|| ||||||||||| ||||| || || || || ||||| ||||||||||| || || ||
Sbjct 41264 CTCCAGCTGCTTACCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATC 41205
Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107
|| || || ||| || || || ||||| || || |||||| ||||| || | ||
Sbjct 41204 CTGGATCTTCGACTTCACATTGTCGATGGTATCGGAGGATTCCACCTCAAGAGTGATTGT 41145
Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| || || | ||| || ||||| | ||||||
Sbjct 41144 CTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 41112
Score = 134 bits (148), Expect = 3e-26
Identities = 148/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
||| ||||| ||||||||||| || || || || || |||| || || | || || ||
Sbjct 40581 AACCAGGTGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGACAGGGTACGGCCGTCCTC 40522
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
|||||||| || || ||||| || || || ||||| || ||||| || || ||||| ||
Sbjct 40521 CAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTG 40462
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
|| ||| |||||| || || |||||||| ||| |||||| |||||||| | |||||
Sbjct 40461 GATCTTTGACTTGACATTGTCGATGGTGTCGGAAGATTCCACCTCAAGGGTGATAGTCTT 40402
Query 195111 TCCTGTCAAAGTTTTTA 195127
|| |||| || ||||
Sbjct 40401 GCCCGTCACTGTATTTA 40385
Score = 122 bits (134), Expect = 2e-22
Identities = 147/200 (74%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
||| ||||||||||| ||||| || || || ||||| || | || || | || || ||
Sbjct 40865 AACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCGTCCTC 40806
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
|||||||| || || ||||| || || || ||||| ||||||||||| || || || ||
Sbjct 40805 CAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTATCCTG 40746
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
|| || ||||||||| |||||||| ||||| || ||||| || || | |||||
Sbjct 40745 GATCTTGGACTTGACGTTGTCAATGGTATCCGACGACTCGACTTCGAGAGTGATGGTCTT 40686
Query 195111 TCCTGTCAAAGTTTTTACGA 195130
|| || | || || ||||
Sbjct 40685 GCCGGTGAGGGTCTTGACGA 40666
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109448691735605
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |