Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq335 114 1e-20 >seq335 Length=221524 Score = 114 bits (126), Expect = 1e-20 Identities = 150/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 48566 TAGCGTGCTCT--CTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 ||||||| || | || || || ||||| ||||| ||| | || | || |||| |||| Sbjct 117036 TAGCGTGGACTGACCTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCATCCTCCAGCTGC 117095 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || || || || ||||| ||||| || |||| ||||| |||||||||||| |||||| Sbjct 117096 TTGCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTG 117155 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || ||| | | || || || | ||| ||||| | |||||||| || |||||| Sbjct 117156 GACTTGACATTGTCGATAGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTC 117215 Query 48744 AAAGTTTTTACAAAAATCTGCATCGTG 48770 | || || || |||||||||||| || Sbjct 117216 AGGGTCTTGACGAAAATCTGCATCTTG 117242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380926852202745