Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1750 280 3e-70 seq1092 230 4e-55 >seq1750 Length=138661 Score = 280 bits (310), Expect = 3e-70 Identities = 968/1481 (65%), Gaps = 63/1481 (4%) Strand=Plus/Minus Query 221416 CGTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG---GCCTC 221472 |||||||||||||||||| || |||||||||||| ||||||| |||| ||||| Sbjct 36198 CGTCAGGGCAGCGTGGTAAATAGTCTCAAAGATCTGAGTGTTGAG---CTTGCGAGCCTC 36142 Query 221473 GGGAGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGAT 221532 || || || |||||||| || | |||| | || ||||| ||||| || || | Sbjct 36141 GGCCGACTCAAACGGCATACGTAGAGCCAAAAAGGCATCAGCCAGACCCTGGACACCAAC 36082 Query 221533 ACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGAC 221592 || || || | ||| | | ||||| | || || ||||| || || ||||| Sbjct 36081 GCCAATAGGACGGTGGCGCATGTTGCTGTTGTGTGCCTCGGGCACAGGGTAGTGATTGAC 36022 Query 221593 GTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTG 221652 || || | || |||||||| || || ||||||| ||| | | || | Sbjct 36021 ATCAATGA------TGCGGTTCAGATTGCGCACC---ACCACCTTGGTGACATCGTGCAG 35971 Query 221653 ATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCT 221712 || | || ||| || || | | | || ||||| | || || | Sbjct 35970 CTT---CTGGAAGTCGTAGCGGTTCTCGCTGTAGTCAACAAACGATGGCAGCGCCAGCGA 35914 Query 221713 GGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAG 221772 ||||||||| ||||| || ||||| || | |||| || ||||| || || || Sbjct 35913 GGCCAGGTTGCACACAGCAACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGCACAG 35854 Query 221773 GTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG-TCCT 221831 |||| || ||||| ||||| | || || || |||||| ||| ||| | |||| Sbjct 35853 GTTGGAGCTGCGAATGGTACCCAGATTCTTTTGGTTGCTCTTGCGGTTG-CAGTGGTCCT 35795 Query 221832 TGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTT 221891 |||| |||||||| || ||||||||| ||| ||| ||| ||| | ||| || | Sbjct 35794 TGTACAGCATAAACGGGTTGCCAGTCTCGGTCTGGGCCTCCAAAATGGCATACCACAGCT 35735 Query 221892 CTCTGGCGCTC-ACCGTCCTCTTGACTGCA-CCCTCGGTCTTTTCATACCCG--GTATAG 221947 ||||| || |||| | | ||| | ||||| ||| || ||| ||| || Sbjct 35734 -TCTGGGCCTTGACCGACTGCC-GACCACGGCCCTC---CTTCTCGTACTTTTCGTACAG 35680 Query 221948 AGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATC 222007 ||| | |||| | || ||||| || ||||||| || ||| | |||||||||| Sbjct 35679 AGCCT--CAAATTCCTCGCCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGACACATC 35622 Query 222008 AGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCC 222067 || |||||| || ||| | | ||| | || |||||| | ||| || |||||||| || Sbjct 35621 AGGGTCCAGTTCTCGTTCTTCTCGACACGCTTCATGAACATGTCGGGAATCCACAGAGCT 35562 Query 222068 TGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAAC 222127 | || || || | || || ||||||| || | || || | ||| || | ||| Sbjct 35561 AGGAACAGGTCACGGGCGCGGACCTCCTCCTTACCATGATTCTTGCGCAGGTCAAGGAAC 35502 Query 222128 TCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTG 222187 ||||| | || ||||||||||||||||| || | ||| | ||| || || ||||||||| Sbjct 35501 TCAAACACATCGGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACCAGGGCGCTTGTTG 35442 Query 222188 CCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCC 222246 || ||||| || | ||| ||| | |||||| | ||| || | || | | || Sbjct 35441 CCGCCCTGGTCGA-CATAGCGGGCAGTGTTGTTGAACACGCGCAGCATGGGGATAATGCC 35383 Query 222247 GTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGA 222306 |||||| ||||||||| || |||||||| || ||| | || ||| || | Sbjct 35382 GTTGGAGGTACCGTTGGTACCAGCAATGTACGAGCCAGTGGCGC---GGATAC-GGTGAA 35327 Query 222307 CAT----GCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCA 222362 ||| |||||||||||| || || || ||||| || || |||||||||| || Sbjct 35326 CATTGAGGCCGATACCACCAGCCATCTTGGAAATCATAGCACAAGTCTTGAGAGTATCGT 35267 Query 222363 TGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATT 222422 ||||| || || ||||||||||| | || | |||||| ||||| |||| ||| | | Sbjct 35266 AAATGCCTTCAATCGAGTCCTCCTTCATGTCAACCAGAAAGCAAGATGACAGCTGGGCCT 35207 Query 222423 TGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCA 222482 | | || ||||| ||||| ||||| |||||| |||||| | || ||||| | Sbjct 35206 GAGGAGTACCAGCGTTGAACAGAGTGGGCGAGGCGTGAGTAAAGAACTTGCTCGACATGA 35147 Query 222483 GATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGCATGGCGCATCTC 222541 | | ||||||||| | ||| | | ||| |||| ||| || | | | || | | Sbjct 35146 GGTTGTACGTCTCAATGACGCGGTCGACTCTGTCACCCCAGATGCCAACAGCCACA-CGC 35088 Query 222542 ATGTACATGTACTGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGCAGGTACGATT 222599 || ||||| |||||| | ||| ||| || | | || ||||||||||| Sbjct 35087 ATAATCATGTGCTGGGGACGCTCGACAATCTTGCCGTCCAACT--TCAGCAGGTACGAAC 35030 Query 222600 TTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGG 222659 ||||| |||||||| |||||||| | | || |||||| | ||| || | ||| | Sbjct 35029 GCTCCAGGGTCTTGAAGCCAAAGTACTGGTAGTTAAAGTCACGATCGTACACAATGGCAG 34970 Query 222660 CGTCCAGCTCCGACTTGTGCTTTACGCTCAACTCGAAAAAGCG-CTC-----AGA-CACG 222712 ||||||||| |||||| | | | ||||| | || ||| ||| || | Sbjct 34969 AGTCCAGCTCATCCTTGTGACGCATGATGCACTCGTA----CGTCTCCTTGGAGATCATG 34914 Query 222713 AGGGGAGCGTTCTCTTTGGTGTCGGGGTTAACGTTGTGGTACAGCTGCCACATGGCATCA 222772 | | ||| || |||| | ||||| |||| ||||||||| | | ||| | Sbjct 34913 GGCGAAGCCTTGCGGTTGG---CCGGGTTGACGTAGTGGTACAGGTCCGACACCACCGAC 34857 Query 222773 GAGAAC-GTGTCGGGAGTCTGCTTGTGCAGATTCGACACGGCGATCCGAGACGCCAAGAT 222831 || || | || | || |||||||| || || ||||||||||| || | |||| || Sbjct 34856 GACCACTGCTTCTTG-GTTTGCTTGTGAAGGTTGGACACGGCGATACGGGCAGCCAGAAT 34798 Query 222832 ACCATAGTCAGGGTGCACGGTGGTCATGCTGGCTAGGGTCT 222872 | ||||| |||||| | ||||||| ||| ||||| Sbjct 34797 GGCGTAGTCGGGGTGCGTGACGGTCATGTAGGCAGCGGTCT 34757 Score = 113 bits (124), Expect = 8e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175 |||||| || ||||| || || | ||||| | | |||||| | ||| |||||| |||| Sbjct 36489 GTTCACAACCTGGAACTCACCGGCAAGCACACGACGCTGGTAAATGTTGGAAGTGTACGG 36430 Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235 || | || ||| ||||||||||| ||||| | ||||||||| || |||||||| |||| Sbjct 36429 CTCAAAGCACTCATTGTTGCCCAGAATCTGCGACGTGCTGGCCGTAGGCATGGGAGCCAG 36370 Query 221236 CAGCAGACTGTTGCGCA 221252 |||||| |||||||| Sbjct 36369 CAGCAGCGAGTTGCGCA 36353 >seq1092 Length=189081 Score = 230 bits (254), Expect = 4e-55 Identities = 571/861 (66%), Gaps = 30/861 (3%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||| ||||| | || |||||| ||||| |||||||| ||| Sbjct 137793 ATCTGGCAAATGTACAAAAAGGCCGAGGCGTCCTTCTGGACTGCCGAGGAGATTGACCTG 137734 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCT-ATC--CAAAGACGAGCAGCATTTTCTCAAG 25593 |||||||| || ||| |||| || | || ||| ||||| || | || || | Sbjct 137733 TCCAAGGACCTGCACGACTGGAACAACCGCATGAACAAGGACGAAAAGTACTTCATCTCG 137674 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 ||||| |||| |||||||| || || || || || || |||||||| ||| |||| | Sbjct 137673 CACGTGCTGGCCTTCTTTGCCGCGTCGGACGGCATTGTCAACGAGAACCTGGTCGAGCGC 137614 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 ||| | | || || ||| | |||||| || |||||||| || ||||| || Sbjct 137613 TTCTCGGGCGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTTCAGATCATGATG 137554 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGTC 25770 || || | ||||| ||| || | ||| ||||| |||||||| | || | Sbjct 137553 GAGAACATCCACTCCGAGACATACTC---GCTGCTGATTGACACGTACATCAAGGAGCCC 137497 Query 25771 GCCGAGAG-AGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829 ||| || | || | |||||| ||||| || || ||| ||||| | ||||| Sbjct 137496 GCCCAGCGCAGCTAC-CTGTTTAACGCCATTGATACTATTCCCTGCATCCGCCGCAAGGC 137438 Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCCA-GAGCGCTACGTTTGGCGAGCGGCTGGTAG 25888 |||||| | |||||||| | ||| ||| | || |||| | | || ||||| | Sbjct 137437 CGACTGGGCCCTCAAGTGGATTGCCGACCACGAGT-CGACCTTTGCCCAACGTCTGGTGG 137379 Query 25889 CCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCT-- 25946 ||||||| || || || |||||||| ||| || | ||||| ||||||| ||||| Sbjct 137378 CCTTTGCCGCCGTCGAAGGCATCTTCTTCTCGGGCGCCTTTGCTTCCATCTTTTGGCTGC 137319 Query 25947 -CAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGAC 26004 ||||| | || | ||||||||| ||| ||||||||||||||| || | | ||| Sbjct 137318 GCAAGC----GCGGTCTCATGCCCGGCCTGACCTTTTCCAACGAGCTGATTTCCCGCGAC 137263 Query 26005 GAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAA--AC 26062 ||||| || |||| ||| |||||||||||||||| | || ||| ||| |||| | Sbjct 137262 GAGGGCCTGCACACAGACTTTGCCTGCCTGCTCTTCTCG---CAC---CTCAACAACCGC 137209 Query 26063 CTTCTCAAGAGACCG-TCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTT 26121 | ||||| | | | | ||||||| || ||||| | || || |||||||| Sbjct 137208 CCCAGCAAGAAGCTGATTGAGGAAATCATCACCGACGCTGTCGCCATTGAAAAGGAGTTC 137149 Query 26122 CNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATAC 26181 | ||||||||| | || |||| || ||| Sbjct 137148 TTGACCGACGCCCTGCCCTGCGCTCTGCTCGGCATGAACGCCGACCTGATGAAGCAGTAC 137089 Query 26182 ATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACG 26241 ||||||| ||| ||||||| ||||||| | || || || | ||||| | | Sbjct 137088 ATTGAGTTTGTTGCCGACCGTCTGCTGGTCGCCCTCGGCAACGAAAAGGTCTACCGCTCC 137029 Query 26242 CCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAA 26301 | ||||| || ||||| ||||| ||||| ||| | | || |||||||||||||| || Sbjct 137028 ACCAACCCCTTTGACTTCATGGAGAACATCTCGCTCGGCGGCAAGACCAACTTCTTCGAG 136969 Query 26302 AAGAGGGTCGGCGACTATCAA 26322 ||| | ||||||||||| ||| Sbjct 136968 AAGCGTGTCGGCGACTACCAA 136948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928817921553600