Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq1654 87.8 2e-12
>seq1654
Length=5849
Score = 87.8 bits (96), Expect = 2e-12
Identities = 300/459 (65%), Gaps = 14/459 (3%)
Strand=Plus/Plus
Query 175231 GAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATCCCC 175290
||| ||||| | || |||||| | ||||||| | | | | || |||||||||||
Sbjct 1589 GAGTTTGTGCAGTTCCTCAAGAAGCCCGAGAAGTTTGTGCGCCTGGGCGCCAAGATCCCA 1648
Query 175291 CGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATC 175350
|| || ||| |||| ||||| || || ||||||||||| || || ||| ||||
Sbjct 1649 CGCGGTGCCATTCTGTCGGGTCCTCCCGGAACGGGAAAGACGCTGCTGGCCAAGGCCACG 1708
Query 175351 GCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGC--CGCAAACTTTGTGGAGATGT 175408
|| || || || || || ||| | ||| | || || | | | ||||| |||||||
Sbjct 1709 GCAGGCGAGTCGGGCGTGCCGTTC-TTCAGCG-TCAGCGGCTCCGAGTTTGTCGAGATGT 1766
Query 175409 TTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAAC 175468
|||| ||||| || | |||| || || || |||| | || ||| | ||| |
Sbjct 1767 TTGTAGGTGTTGGCCCATCGCGGGTGCGGGACCTGTTTGCCACGGCACGCAAGAATGCGC 1826
Query 175469 CATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACGCAGCG-CTGG--TG 175525
| || || |||| ||||| |||||||| || | ||| | || | || || |
Sbjct 1827 CGTGCATCATCTTTATTGACGAGATTGACGCCATTGGCCGGTCGCGTACCGACTCGAACC 1886
Query 175526 GTATG---CCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACTCACCGAGATGG 175582
||||| | || |||||| | || || | || || | || || |||||||
Sbjct 1887 GTATGGGTGGTGGCAACGACGAGCGCGAGTCGACGCTGAACCAGATTCTGACAGAGATGG 1946
Query 175583 ATGGCTTTGACAATGAGACTGGC--ATTGTGGTTATTGCGGCCACTAATCGCGTGGATAT 175640
| || || ||| || | || |||||||| | || | ||| || || | ||||||
Sbjct 1947 ACGGGTTCAACA--CAGCCGAGCAGATTGTGGTGCTGGCTGGCACGAACCGGGCGGATAT 2004
Query 175641 CCTTGATGACGCCCTCCTTCGCCCGGGTCGTTTTGATCG 175679
||| || | || || | || ||||| || ||||||||
Sbjct 2005 CCTGGACAAGGCGCTGATGCGGCCGGGCCGGTTTGATCG 2043
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596552336767200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |