Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1654 87.8 2e-12 >seq1654 Length=5849 Score = 87.8 bits (96), Expect = 2e-12 Identities = 300/459 (65%), Gaps = 14/459 (3%) Strand=Plus/Plus Query 175231 GAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATCCCC 175290 ||| ||||| | || |||||| | ||||||| | | | | || ||||||||||| Sbjct 1589 GAGTTTGTGCAGTTCCTCAAGAAGCCCGAGAAGTTTGTGCGCCTGGGCGCCAAGATCCCA 1648 Query 175291 CGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATC 175350 || || ||| |||| ||||| || || ||||||||||| || || ||| |||| Sbjct 1649 CGCGGTGCCATTCTGTCGGGTCCTCCCGGAACGGGAAAGACGCTGCTGGCCAAGGCCACG 1708 Query 175351 GCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGC--CGCAAACTTTGTGGAGATGT 175408 || || || || || || ||| | ||| | || || | | | ||||| ||||||| Sbjct 1709 GCAGGCGAGTCGGGCGTGCCGTTC-TTCAGCG-TCAGCGGCTCCGAGTTTGTCGAGATGT 1766 Query 175409 TTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAAC 175468 |||| ||||| || | |||| || || || |||| | || ||| | ||| | Sbjct 1767 TTGTAGGTGTTGGCCCATCGCGGGTGCGGGACCTGTTTGCCACGGCACGCAAGAATGCGC 1826 Query 175469 CATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACGCAGCG-CTGG--TG 175525 | || || |||| ||||| |||||||| || | ||| | || | || || | Sbjct 1827 CGTGCATCATCTTTATTGACGAGATTGACGCCATTGGCCGGTCGCGTACCGACTCGAACC 1886 Query 175526 GTATG---CCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACTCACCGAGATGG 175582 ||||| | || |||||| | || || | || || | || || ||||||| Sbjct 1887 GTATGGGTGGTGGCAACGACGAGCGCGAGTCGACGCTGAACCAGATTCTGACAGAGATGG 1946 Query 175583 ATGGCTTTGACAATGAGACTGGC--ATTGTGGTTATTGCGGCCACTAATCGCGTGGATAT 175640 | || || ||| || | || |||||||| | || | ||| || || | |||||| Sbjct 1947 ACGGGTTCAACA--CAGCCGAGCAGATTGTGGTGCTGGCTGGCACGAACCGGGCGGATAT 2004 Query 175641 CCTTGATGACGCCCTCCTTCGCCCGGGTCGTTTTGATCG 175679 ||| || | || || | || ||||| || |||||||| Sbjct 2005 CCTGGACAAGGCGCTGATGCGGCCGGGCCGGTTTGATCG 2043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596552336767200