Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq2205 235 7e-56 seq1092 143 3e-28 seq1590 134 2e-25 seq1595 104 3e-16 seq1750 98.7 1e-14 seq1155 95.1 1e-13 >seq2205 Length=239025 Score = 235 bits (260), Expect = 7e-56 Identities = 290/397 (73%), Gaps = 6/397 (2%) Strand=Plus/Plus Query 18092 CCACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGT 18151 ||| ||| |||||||||||||| || ||||||||||||||||||| | ||| ||| Sbjct 16419 CCAGCTTCGGCGAGTCGCACGGCAAGGCCGTCGGCTGCATCATCGACAACCCGCCCCCGG 16478 Query 18152 GCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGG 18211 || || | ||| |||| |||||||||||||| ||| | |||||||| || |||||| Sbjct 16479 GCTTGTCCCTGACCGAAGCCGACATCCAGCCGCAGCTCACGCGGCGCCGGCCCGGCCAGA 16538 Query 18212 GCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGA 18271 || | | | || ||||| ||||| || ||||| | ||||| |||||| || Sbjct 16539 GCTCCATCACGACACCGCGTAACGAAAAAGACCGCGTGACCATCCTCTCGGGCTGCGAAT 16598 Query 18272 ACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCG 18331 ||||| ||| |||||| | ||| ||| ||| || |||| |||||||||||| Sbjct 16599 TCGGCCGCACCCTCGGCACCCCCATCGCCCTGACCGTCAACAACGAGGACCAGCGGCCCC 16658 Query 18332 TCGACTATTCCGA------CATGTGCAAGGTGCCGCGGCCCTCACACGCCGACTACACCT 18385 |||||| | | |||| |||| | ||||| ||||| |||||||||| ||||| Sbjct 16659 GCGACTACGGCAACCAGACCATGGACAAGTTCCCGCGCCCCTCGCACGCCGACTTCACCT 16718 Query 18386 ACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGCGAGA 18445 || || || |||||||||||||| ||||| ||||| ||||| |||||||||| Sbjct 16719 ACCAGGAGAAATACGGCATCAAGGCCTCGTCCGGCGGCGGCCGCAGCAGCGCCCGCGAGA 16778 Query 18446 CCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482 || | |||||| ||||||||||| || ||||| || Sbjct 16779 CCATTGCGCGCGTGGCCGCCGGCGCCGTGGCCGAAAA 16815 Score = 116 bits (128), Expect = 5e-20 Identities = 112/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 19055 CGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCCGTGCTT 19114 ||||||||| || || ||||| ||||||||||| | ||||| ||||||||| ||| Sbjct 17059 CGGCGGCACCGTAACCTGCGTCATCCGCAACGTGCCCACCGGCCTGGGCGAGCCGGCCTT 17118 Query 19115 TGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGGATT 19174 ||||||| |||||||| ||| || |||||||||||| ||||| ||| ||||| || Sbjct 17119 TGACAAGCTCGAGGCCATGCTGGCGCACGCCATGCTGAGCATCCCCGCCTGCAAGGCCTT 17178 Query 19175 CGAGATTGGCAGCGGGTTTGCGGG 19198 ||||||||| || ||||| || Sbjct 17179 TGAGATTGGCTCGGGCTTTGCCGG 17202 >seq1092 Length=189081 Score = 143 bits (158), Expect = 3e-28 Identities = 224/316 (71%), Gaps = 6/316 (2%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| ||||| || ||| |||||| |||||||||||||| |||||||||| Sbjct 136943 GCCTTTTGGTAGTCGCCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGCGAGATG 137002 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | || ||||||| | |||| ||||||| ||||| | | Sbjct 137003 TTCTCCATGAAGTCAAAGGGGTTGGTGGAGCGGTAGACCTTTTCGTTGCCGAGGGCGACC 137062 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||| |||||||| |||||||| |||||||| ||| ||| ||||||||||||||| Sbjct 137063 AGCAGACGGTCGGCAACAAACTCAATGTACTGCTTCATCAGGTCGGCGTTCATGCCGAGC 137122 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || ||||| | ||| ||| ||||| || || || |||| || ||| |||| Sbjct 137123 AGAGCGCAGGGCAGGGCGTCGGTCAAGAACTCCTTTTCAATGGCGACAGCGTCGGTGATG 137182 Query 868931 ATCTGCCTGGGCA-CGTC-GGCCGAGG-GCTTGTTGACGAGCATCGTGTAGAGCAGGCAG 868987 || | | || | || || | || | ||||||| | | || | ||||||||||| Sbjct 137183 ATTTCCTCAATCAGCTTCTTGCTGGGGCGGTTGTTGAGGTG---CGAGAAGAGCAGGCAG 137239 Query 868988 GCAAAGTCGCAGTGCA 869003 |||||||| ||||| Sbjct 137240 GCAAAGTCTGTGTGCA 137255 Score = 141 bits (156), Expect = 1e-27 Identities = 207/288 (72%), Gaps = 11/288 (4%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || |||||||| |||| |||||| ||||| |||||||||||||| |||||||| Sbjct 137258 CCCTCGTCGCGGGAAATCAGCTCGTTGGAAAAGGTCAGGCCGGGCATGAGACCGCGCTTG 137317 Query 869240 TTGAGCCAAAAGATGG-CGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||||||| ||| || ||||||||| |||||||| |||||||||||||| Sbjct 137318 CGCAGCCAAAAGATGGAAGCA-AAGGCGCCCGAGAAGAAGATGCCTTCGACGGCGGCAAA 137376 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTG---ATCCACTTCATCGC 869355 | | | || || | ||||||| ||||| ||| | || | |||||||| | || Sbjct 137377 GGCCACCAGACGTTGGGCAAAG--GTCGA----CTCGTGGTCGGCAATCCACTTGAGGGC 137430 Query 869356 CCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTT 869415 |||||||||||| | | | || | || || |||||| ||| |||| | Sbjct 137431 CCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTATCAATGGCGTTAAACAGGTAGCTGCG 137490 Query 869416 TTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 | ||| || ||||||| || ||||| ||||| ||||| || ||||| Sbjct 137491 CTGGGCGGGCTCCTTGATGTACGTGTCAATCAGCAGCGAGTATGTCTC 137538 >seq1590 Length=8670 Score = 134 bits (148), Expect = 2e-25 Identities = 92/104 (88%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 1592190 CCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGA 1592249 |||| ||| | ||||||||||||||||||||| |||| |||||| | ||||||||||||| Sbjct 1000 CCAATTACTTGGACATCAAGCCTCTGCTCGATGTTGGCTGCAAGACCGTGGCCAACATGA 1059 Query 1592250 TCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATC 1592293 | ||||||||||| ||||| |||||||||||||| || |||||| Sbjct 1060 TTAAGGGCAAGTCCCCCGAAGAGATCCGCAAGACATTCAACATC 1103 >seq1595 Length=166483 Score = 104 bits (114), Expect = 3e-16 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 1574058 CTGCCGCCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCG 1574117 || || | ||| ||||||||| |||| ||||||||||| ||||||| | || || | Sbjct 48134 CTCCCCCACGGCCGCCACAAGCTGATTATCCTCGACGAAGCCGACTCGATGACATCTGGT 48075 Query 1574118 GCCCAGCAGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTG 1574177 ||||| || |||||||| ||| ||||||| || ||||||| || ||||||||| | Sbjct 48074 GCCCAACAAGCCCTGCGCCGCACAATGGAAATTTACTCCAACACCACCCGCTTTGCCTTT 48015 Query 1574178 GCGTGCAACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGCGCCATTCTGCGC 1574237 || |||||| ||| | | |||| || | || || || ||||| |||||||| Sbjct 48014 GCATGCAACCAGTCCAACAAGATCATTGAACCGCTGCAGTCCCGTTGCGCTATTCTGCGG 47955 Query 1574238 TTTGTGCGCCTG 1574249 | | ||| ||| Sbjct 47954 TACGCGCGTCTG 47943 >seq1750 Length=138661 Score = 98.7 bits (108), Expect = 1e-14 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 1627870 TCGGCGAGGCCCTGCACGCCGACGCCCATCGGCCGGTGGCGCAGGTTCGAGTGGCGGGCC 1627929 || || || ||||| || || ||||| || || |||||||||| ||| || | | ||| Sbjct 36104 TCAGCCAGACCCTGGACACCAACGCCAATAGGACGGTGGCGCATGTTGCTGTTGTGTGCC 36045 Query 1627930 TCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGTTGAGGTTGCCCACCACGACCTGG 1627989 |||||||| |||||||| |||| || || | |||||| || |||| |||||| |||| | Sbjct 36044 TCGGGCACAGGGTAGTGATTGACATCAATGATGCGGTTCAGATTGCGCACCACCACCTTG 35985 Query 1627990 ACGATCTCGTGCAG 1628003 || |||||||| Sbjct 35984 GTGACATCGTGCAG 35971 Score = 86.0 bits (94), Expect = 8e-11 Identities = 87/111 (78%), Gaps = 2/111 (2%) Strand=Plus/Minus Query 1627409 TGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGGAGCGAGTTGC 1627468 |||||||||| ||||||||||| ||||||| |||||| | |||| || |||||||||| Sbjct 36415 TGTTGCCCAGAATCTGCGACGTGCTGGCCGTAGGCATGGGAGCCAGCAGCAGCGAGTTGC 36356 Query 1627469 GCAGGCCGTGCTG-TCGAACTAGCGCGCGCAGCGCGTCCCAGTCCCAGCGG 1627518 ||| |||||||| | || || || | |||| ||||||||||| || Sbjct 36355 GCACACCGTGCTGCTTGATCT-GCTCCTTGAGCGAAGCCCAGTCCCAGAGG 36306 >seq1155 Length=43631 Score = 95.1 bits (104), Expect = 1e-13 Identities = 131/183 (72%), Gaps = 3/183 (2%) Strand=Plus/Minus Query 1852069 GCTCATCTTGCCGCTCTCGGTGAGGCCCGGCACGAGCGGGTTGAGCAGGTGGAAGCGCTT 1852128 |||||||||||||| | | || || ||||| | ||||| | ||||||| | || || Sbjct 32181 GCTCATCTTGCCGC---CAGACAGACCAGGCACCATGGGGTTCATCAGGTGGCAACGGTT 32125 Query 1852129 CCGATAGCCGAGGACCGGCAGGTGGTCGCGCGCAAAGGCAAATATCTTGCGCTGGTCGCG 1852188 | |||| || |||| ||| ||| | | |||| |||||||||||||| | Sbjct 32124 CTTGAAGCCCAGCTTGGGCATAGCGTCATGCGACAGGCCAAAGATCTTGCGCTGGTCCAG 32065 Query 1852189 CCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCGTCGAGGGCCTGCATGAGCGGGTA 1852248 |||||||||| ||| || || || |||| || |||||| || |||||| |||||||| Sbjct 32064 ACCGCCAAACTCGGCATCAACATCCAGGTACTCCTCGTCCAGTAGCTGCATCAGCGGGTA 32005 Query 1852249 GAG 1852251 || Sbjct 32004 CAG 32002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106949220258855