Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq1092 170 3e-36
seq1750 143 4e-28
seq1595 123 4e-22
seq1590 116 6e-20
seq2006 104 4e-16
seq1155 102 1e-15
seq1249 89.7 8e-12
>seq1092
Length=189081
Score = 170 bits (188), Expect = 3e-36
Identities = 237/330 (72%), Gaps = 9/330 (3%)
Strand=Plus/Plus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
|| |||||||| |||| |||||| |||| |||||||||||||| ||||||||
Sbjct 137258 CCCTCGTCGCGGGAAATCAGCTCGTTGGAAAAGGTCAGGCCGGGCATGAGACCGCGCTTG 137317
Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460
||||||||||||| | || ||||||||| |||||||| |||||||||||||||
Sbjct 137318 CGCAGCCAAAAGATGGAAGCAAAGGCGCCCGAGAAGAAGATGCCTTCGACGGCGGCAAAG 137377
Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTG---ATCCACTTCATCGCC 794517
| || || || | |||||| ||| | ||| | || | |||||||| | |||
Sbjct 137378 GCCACCAGACGTTGGGCAAA--GGTCGA----CTCGTGGTCGGCAATCCACTTGAGGGCC 137431
Query 794518 CACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTC 794577
|| || ||||| | | |||| | || || |||||| ||| |||| | |
Sbjct 137432 CAGTCGGCCTTGCGGCGGATGCAGGGAATAGTATCAATGGCGTTAAACAGGTAGCTGCGC 137491
Query 794578 TCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTT 794637
| | | || ||||||| ||| ||||| || || |||||||| ||||| |||||||||||
Sbjct 137492 TGGGCGGGCTCCTTGATGTACGTGTCAATCAGCAGCGAGTATGTCTCGGAGTGGATGTTC 137551
Query 794638 TCGATGGCGATCTGGAAGCCATAAAAGCAG 794667
|| || |||||| ||||| || ||||||
Sbjct 137552 TCCATCATGATCTGAAAGCCGTAGAAGCAG 137581
Score = 132 bits (146), Expect = 8e-25
Identities = 169/233 (73%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967
|| ||||| || ||| |||||| |||||||||||||| |||||||||| ||||||
Sbjct 136952 TAGTCGCCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGCGAGATGTTCTCCATG 137011
Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGG 794027
| || ||||||| | ||||| ||| ||| ||||| | | ||||| |||
Sbjct 137012 AAGTCAAAGGGGTTGGTGGAGCGGTAGACCTTTTCGTTGCCGAGGGCGACCAGCAGACGG 137071
Query 794028 TCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACG 794087
||||| || || ||||||||||| ||| ||| ||||||||||||||| || || |
Sbjct 137072 TCGGCAACAAACTCAATGTACTGCTTCATCAGGTCGGCGTTCATGCCGAGCAGAGCGCAG 137131
Query 794088 GGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGAT 794140
||||| | ||| | | ||||| || || || |||| || ||| |||||||
Sbjct 137132 GGCAGGGCGTCGGTCAAGAACTCCTTTTCAATGGCGACAGCGTCGGTGATGAT 137184
>seq1750
Length=138661
Score = 143 bits (158), Expect = 4e-28
Identities = 335/504 (66%), Gaps = 15/504 (3%)
Strand=Plus/Minus
Query 2073537 GCACTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTT 2073596
|| ||||||||||||||| || |||| ||| || ||||| |||||||| | || ||||||
Sbjct 35439 GCCCTGGTCGACATAGCGGGCAGTGTTGTTGAACACGCGCAGCATGGGGATAATGCCGTT 35380
Query 2073597 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAA 2073656
||| |||||||| || || | ||| | ||| | |||||| | ||| | |
Sbjct 35379 GGAGGTACCGTTGGTACCAGCAATGTACGAGCCAGTGGCGCGGATACGGTGAACATTGAG 35320
Query 2073657 GCCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCC 2073716
|||||| || || ||| |||||| || | || || | || || || ||||| |||||
Sbjct 35319 GCCGATACCACCAGCCATCTTGGAAATCATAGCACAAGTCTTGAGAGTATCGTAAATGCC 35260
Query 2073717 CTCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGT 2073776
|| |||||||| |||||||||| | ||||||||| || || || | | | ||
Sbjct 35259 TTCAATCGAGTCCTCCTTCATGTCAACCAGAAAGCAAGATGACAGCTGGGCCTGAGGAGT 35200
Query 2073777 GCCGGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTA 2073836
|| || ||||| || ||||||| || || | ||| |||||| | |||
Sbjct 35199 ACCAGCGTTGAACAGAGTGGGCGAGGCGTGAGTAAAGAACTTGCTCGACATGAGGTTGTA 35140
Query 2073837 GGTGGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGC 2073896
|| | | ||||| ||| ||| || | | ||| || ||| | ||
Sbjct 35139 CGTCTCAATGACGCG---------GTC---GAC-TCTGTCACCCC--AGATGCCAACAGC 35095
Query 2073897 GACGCGCATGATCATGTACTGGGGTCGCTCGACGACGGCGTCGCGCACCTTGGTCAGGTA 2073956
|| ||||| ||||||| |||||| |||||||| | | || || ||| ||||||
Sbjct 35094 CACACGCATAATCATGTGCTGGGGACGCTCGACAATCTTGCCGTCCAACTTCAGCAGGTA 35035
Query 2073957 GGACCGACGCAGGGTCGCCAGGCCAAAGTACGAGTAGGCCAGGTCGCGCTCGTGGCGGAT 2074016
|| || ||||||| | |||||||||| |||| | ||| || |||| ||
Sbjct 35034 CGAACGCTCCAGGGTCTTGAAGCCAAAGTACTGGTAGTTAAAGTCACGATCGTACACAAT 34975
Query 2074017 GGCGGCGTCGAGGGCCTCCTTGTG 2074040
||| | ||| || | ||||||||
Sbjct 34974 GGCAGAGTCCAGCTCATCCTTGTG 34951
Score = 95.1 bits (104), Expect = 2e-13
Identities = 152/214 (71%), Gaps = 6/214 (3%)
Strand=Plus/Minus
Query 2070040 GACGCCGTCGCCGCCGCATGGTAGATCGTCTCAAAGATGGTGCG-GTTGAGGCGACGCGC 2070098
||||||||| || || ||||| || ||||||||||| || | |||||| || ||
Sbjct 36203 GACGCCGTCAGGGCAGCGTGGTAAATAGTCTCAAAGATC-TGAGTGTTGAGCTTGCGAGC 36145
Query 2070099 GCCGGCGCTCTCCCACGGCAGGTCCATCATGGCAAAC--GCGTCGGCCAGGCCCTGCACG 2070156
|||| ||| |||||| | | | | |||| || || ||||| ||||| ||
Sbjct 36144 CTCGGCCGACTCAAACGGCA--TACGTAGAGCCAAAAAGGCATCAGCCAGACCCTGGACA 36087
Query 2070157 CCGACGCCCATCGGCCGGTGGCGCAGGTTCGAGTGCCGGGCCTCGGGCACCGGGTAGTGG 2070216
|| ||||| || || |||||||||| ||| || | ||||||||||| ||||||||
Sbjct 36086 CCAACGCCAATAGGACGGTGGCGCATGTTGCTGTTGTGTGCCTCGGGCACAGGGTAGTGA 36027
Query 2070217 TTGATGTCGATCACGCGGTTGAGGTTGGCCACCA 2070250
|||| || || | |||||| || ||| |||||
Sbjct 36026 TTGACATCAATGATGCGGTTCAGATTGCGCACCA 35993
>seq1595
Length=166483
Score = 123 bits (136), Expect = 4e-22
Identities = 182/258 (71%), Gaps = 0/258 (0%)
Strand=Plus/Minus
Query 2019182 GAAAAGAATCGACCTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTG 2019241
||||| | || || || | ||||||||||||| |||| |||||||| || |||||||
Sbjct 48147 GAAAAAAGTCACTCTCCCCCACGGCCGCCACAAGCTGATTATCCTCGACGAAGCCGACTC 48088
Query 2019242 CCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGAC 2019301
| || || | ||||| || ||||| || || ||||||| ||| ||||||| ||
Sbjct 48087 GATGACATCTGGTGCCCAACAAGCCCTGCGCCGCACAATGGAAATTTACTCCAACACCAC 48028
Query 2019302 GCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTG 2019361
|| ||||| | || |||||| ||| | | |||| ||| | || ||| ||||||
Sbjct 48027 CCGCTTTGCCTTTGCATGCAACCAGTCCAACAAGATCATTGAACCGCTGCAGTCCCGTTG 47968
Query 2019362 CGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGAT 2019421
||| || |||| | ||||| || || |||| ||| | | | || ||| | ||||
Sbjct 47967 CGCTATTCTGCGGTACGCGCGTCTGACAGACGAACAGGTGGTCAAACGGTTGCTCCAGAT 47908
Query 2019422 TATCGACGCCGAAAAGGT 2019439
||||| || ||||||||
Sbjct 47907 CATCGAGGCAGAAAAGGT 47890
>seq1590
Length=8670
Score = 116 bits (128), Expect = 6e-20
Identities = 88/104 (85%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 2035651 CCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTA 2035710
|||| ||| | ||||||||||| || |||||| | || |||||||||||||||||| | |
Sbjct 1000 CCAATTACTTGGACATCAAGCCTCTGCTCGATGTTGGCTGCAAGACCGTGGCCAACATGA 1059
Query 2035711 TCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATC 2035754
| ||||||||||| ||||| || ||||||||||| || ||||||
Sbjct 1060 TTAAGGGCAAGTCCCCCGAAGAGATCCGCAAGACATTCAACATC 1103
>seq2006
Length=104922
Score = 104 bits (114), Expect = 4e-16
Identities = 75/87 (86%), Gaps = 0/87 (0%)
Strand=Plus/Plus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
|||||||||||| |||||||||||||| || ||||||||| ||||||| || || |||
Sbjct 95416 GTACTTGGTGACCGCCTTGGTACCCTCAGAAACGGCGTGCTTGGCCAGCTCACCAGGCAG 95475
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTC 1485557
|||||||||||| ||||||||||||
Sbjct 95476 GATCAGGCGCACACTGGTCTGGATCTC 95502
>seq1155
Length=43631
Score = 102 bits (112), Expect = 1e-15
Identities = 131/180 (73%), Gaps = 3/180 (2%)
Strand=Plus/Minus
Query 2411412 GCTCATCTTGCCGTCCTTGGTGAGGCCCGGCACCAGCGGGTTGAGCAGGTGGATGCGCTT 2411471
||||||||||||| | | || || ||||||| ||||| | ||||||| || ||
Sbjct 32181 GCTCATCTTGCCGCCA---GACAGACCAGGCACCATGGGGTTCATCAGGTGGCAACGGTT 32125
Query 2411472 GCGGTAGCCCAGCGCCGGCAGGTGGTCGCGCGCAAAGGCAAAGATCTTGCGCTGGTCGCG 2411531
| |||||||| |||| ||| ||| | | ||||||||||||||||||| |
Sbjct 32124 CTTGAAGCCCAGCTTGGGCATAGCGTCATGCGACAGGCCAAAGATCTTGCGCTGGTCCAG 32065
Query 2411532 CCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCGTCGAGGGCCTGCATGAGCGGGTA 2411591
|||||||||| ||| || || || |||| || |||||| || |||||| ||||||||
Sbjct 32064 ACCGCCAAACTCGGCATCAACATCCAGGTACTCCTCGTCCAGTAGCTGCATCAGCGGGTA 32005
>seq1249
Length=41204
Score = 89.7 bits (98), Expect = 8e-12
Identities = 78/97 (80%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 2175076 TGCCGTCGGTGCCGTTTTTAAACCCGACCGGCAACGGCAGCGCCGACGCCATTTCGCGGT 2175135
|||||||||||||||| || || || || || |||| ||| | ||||||| ||| ||||
Sbjct 35737 TGCCGTCGGTGCCGTTCTTGAAGCCCACGGGGAACGACAGACCAGACGCCAGTTCACGGT 35796
Query 2175136 GCACCTGGCTCTCGGTGGTGCGCGCGCCCACGGCGCC 2175172
||| ||| |||||||||||||||||| | |||||
Sbjct 35797 GCAGCTGCGACTCGGTGGTGCGCGCGCCAATAGCGCC 35833
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916000142891285
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |