Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq1628 95.1 9e-14
>seq1628
Length=158365
Score = 95.1 bits (104), Expect = 9e-14
Identities = 159/229 (69%), Gaps = 1/229 (0%)
Strand=Plus/Minus
Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310
||||| |||| | || || | ||||| || |||||||||| |||||| || ||
Sbjct 40298 CCATCCTCAATGGTCAGCAGCGACACATCGAAAGTACCACCACCCAGATCAAAGATCAGG 40239
Query 282311 ACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 282370
|| || || || || || |||||||| || |||| ||||| ||||| ||
Sbjct 40238 ACGTTGCGCTCGCCCTCAACCTTCTTGTCAAGACCGTAGGCAATGGCAGCGGCAGTGGGC 40179
Query 282371 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 282430
|| || || || | || || || ||||||||||| || ||||| || ||||| ||
Sbjct 40178 TCGTTGATGATACGCAGGACGTTGAGACCAGCAATGAGACCAGCATCCTTGGTGGCCTGA 40119
Query 282431 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTA 282479
| || || ||||| || || || |||||||| || ||||| | |||||
Sbjct 40118 CGCTGAGAGTCGTTGAAGTAAGCGGGAACAGTGATGACGGCGT-TGTTA 40071
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740516743283190
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |