Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq1628 95.1 9e-14 >seq1628 Length=158365 Score = 95.1 bits (104), Expect = 9e-14 Identities = 159/229 (69%), Gaps = 1/229 (0%) Strand=Plus/Minus Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310 ||||| |||| | || || | ||||| || |||||||||| |||||| || || Sbjct 40298 CCATCCTCAATGGTCAGCAGCGACACATCGAAAGTACCACCACCCAGATCAAAGATCAGG 40239 Query 282311 ACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 282370 || || || || || || |||||||| || |||| ||||| ||||| || Sbjct 40238 ACGTTGCGCTCGCCCTCAACCTTCTTGTCAAGACCGTAGGCAATGGCAGCGGCAGTGGGC 40179 Query 282371 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 282430 || || || || | || || || ||||||||||| || ||||| || ||||| || Sbjct 40178 TCGTTGATGATACGCAGGACGTTGAGACCAGCAATGAGACCAGCATCCTTGGTGGCCTGA 40119 Query 282431 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTA 282479 | || || ||||| || || || |||||||| || ||||| | ||||| Sbjct 40118 CGCTGAGAGTCGTTGAAGTAAGCGGGAACAGTGATGACGGCGT-TGTTA 40071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740516743283190