Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq1092 138 1e-27
>seq1092
Length=189081
Score = 138 bits (152), Expect = 1e-27
Identities = 312/461 (68%), Gaps = 11/461 (2%)
Strand=Plus/Minus
Query 50274 ACTTTGGCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGC 50333
|| || ||| ||||| | ||||| |||||| || ||||| | || || || || |
Sbjct 137400 ACCTTTGCCCAACGTCTGGTGGCCTTTGCCGCCGTCGAAGGCATCTTCTTCTCGGGCGCC 137341
Query 50334 TTTGCAGCCATATTTTACATTAAAACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAAC 50393
||||| |||| |||| | | || | ||||||||||| || ||| ||||
Sbjct 137340 TTTGCTTCCATCTTTTGGCTGCGCAAGCGCGGTCTCATGCCCGGCCTGACCTTTTCCAAC 137281
Query 50394 GAGTTGATTTCGCGCGACGAAGGAATGCACACAGACTTTGCGTGTTTGTACTACAATACG 50453
||| ||||||| |||||||| || |||||||||||||||| || || || | ||
Sbjct 137280 GAGCTGATTTCCCGCGACGAGGGCCTGCACACAGACTTTGCCTGCCTGCTCTTCT---CG 137224
Query 50454 CGCGTAAATGAAAAATTATCAT-ACGAAACA-ATTTTGGACATGTTCAAAGAAGCCGTCG 50511
| | | || || || | ||| | ||| ||| || ||| || || ||||
Sbjct 137223 CACCTCAAC--AACCGCCCCAGCAAGAAGCTGATTGAGGAAATCATCACCGACGCTGTCG 137166
Query 50512 ACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGCATGAACGCAG 50571
||| ||||| ||||| || || ||||| | ||| || || | ||||||||||| |
Sbjct 137165 CCATTGAAAAGGAGTTCTTGACCGACGCCCTGCCCTGCGCTCTGCTCGGCATGAACGCCG 137106
Query 50572 ACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTTGTTGCAGCTGGGACAAC 50631
|| ||||| ||||||||||||||||||| ||| | || || | || || |||
Sbjct 137105 ACCTGATGAAGCAGTACATTGAGTTTGTTGCCGACCGTCTGCTGGTCGCCCTCGG-CAA- 137048
Query 50632 CGAAATACTATAATGCAC--GTAACCCCTTTCCGTTTATGAATAACATATCGTTGGAGGG 50689
||||| | || || | ||||||||| || ||| | ||||| ||| | | ||
Sbjct 137047 CGAAAAGGTCTACCGCTCCACCAACCCCTTTGACTTCATGGAGAACATCTCGCTCGGCGG 136988
Query 50690 CAAAACAAACTTTTTCGAAAGACGTGTAGGCGAATACAAAA 50730
||| || ||||| ||||| | ||||| ||||| ||| |||
Sbjct 136987 CAAGACCAACTTCTTCGAGAAGCGTGTCGGCGACTACCAAA 136947
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488529862758000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |