Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq2283 120 6e-22
>seq2283
Length=86879
Score = 120 bits (132), Expect = 6e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| ||||| | ||| |||||||| || ||||| || || || ||||| || | | |||
Sbjct 40870 CGGAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCG 40811
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || || |||||||||||||| || | || || || ||||| || || ||||||
Sbjct 40810 TCCTCCAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTA 40751
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| || ||||| | || || || ||||| ||||| | || ||||| | ||| ||
Sbjct 40750 TCCTGGATCTTGGACTTGACGTTGTCAATGGTATCCGACGACTCGACTTCGAGAGTGATG 40691
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATAT 82804
|||||||| || | ||||| || | |||
Sbjct 40690 GTCTTGCCGGTGAGGGTCTTGACGACTAT 40662
Score = 107 bits (118), Expect = 4e-18
Identities = 145/202 (72%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| ||||| | ||| ||||| || || ||||| || ||||| || || || | | |||
Sbjct 40586 CGGAGAACCAGGTGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGACAGGGTACGGCCG 40527
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || || |||||||||||||| || | || || || || || || || |||||
Sbjct 40526 TCCTCCAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGAATACCCTCCTTG 40467
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| || ||||||| || ||||| || || || || || ||| || || | || ||
Sbjct 40466 TCCTGGATCTTTGACTTGACATTGTCGATGGTGTCGGAAGATTCCACCTCAAGGGTGATA 40407
Query 82776 GTCTTGCCTGTCAACGTCTTTA 82797
|||||||| |||| || ||||
Sbjct 40406 GTCTTGCCCGTCACTGTATTTA 40385
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981798078084785
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |