Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq2283 95.1 3e-14
>seq2283
Length=86879
Score = 95.1 bits (104), Expect = 3e-14
Identities = 145/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || ||||| || || || |||||| | ||||| || || || || | ||
Sbjct 40670 CAAGACCCTCACCGGCAAGACCATCACTCTCGAAGTCGAGTCGTCGGATACCATTGACAA 40729
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| ||||| || || || || || ||| |||||| || | || |||||
Sbjct 40730 CGTCAAGTCCAAGATCCAGGATAAGGAGGGCATTCCTCCGGACCAGCAGCGTCTGATCTT 40789
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|| ||||||||| |||| || || | || || | || |||||| ||||||| |||||
Sbjct 40790 TGCTGGAAAGCAGCTGGAGGACGGCCGTACCCTGTCTGACTACAACATCCAGAAGGAGTC 40849
Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390
|||||||||||| ||| | | |||||
Sbjct 40850 TACTCTTCACCTGGTTCTCCGCCTTCG 40876
Score = 89.7 bits (98), Expect = 1e-12
Identities = 144/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || || || || || || |||||| | ||||| || || || || | ||
Sbjct 40898 CAAGACTCTTACCGGCAAGACCATCACTCTCGAAGTCGAGTCGTCGGATACCATTGACAA 40957
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| ||||| || || || || || ||| |||||| || | || || ||
Sbjct 40958 CGTCAAGTCCAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAGCAGCGTCTGATTTT 41017
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||| || |||||| |||| ||||| | || || | || |||||| ||||||| |||||
Sbjct 41018 CGCGGGTAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATCCAGAAGGAGTC 41077
Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390
|||||||||||| ||| | | |||||
Sbjct 41078 TACTCTTCACCTGGTTCTCCGCCTTCG 41104
Score = 84.2 bits (92), Expect = 5e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
||||| | | ||| ||||||||||||||||| ||||||| || ||||||| || ||
Sbjct 40876 CGAAGGCGGAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTA 40817
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
| || || |||||||||||||| || ||||| || || || ||
Sbjct 40816 CGGCCGTCCTCCAGCTGCTTTCCAGCAAAGATCAGACGCTGCTG 40773
Score = 84.2 bits (92), Expect = 5e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
||||| | | ||| ||||||||||||||||| ||||||| || ||||||| || ||
Sbjct 41104 CGAAGGCGGAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTA 41045
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
| ||||| ||||||||||| || ||||| || || || || ||
Sbjct 41044 CGGCCATCCTCCAGCTGCTTACCCGCGAAAATCAGACGCTGCTG 41001
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181785746087115
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |