Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq534 91.5 2e-13 >seq534 Length=62730 Score = 91.5 bits (100), Expect = 2e-13 Identities = 163/229 (71%), Gaps = 8/229 (3%) Strand=Plus/Minus Query 147105 CACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGG 147164 |||||| |||||| | || |||||||||||||| ||||| ||||||||||| Sbjct 46360 CACGTAGAACTGGGCAAACATATGGCACGGCGGCAGGGCCATCTTTTTGAGGTCCGCGGG 46301 Query 147165 GTTCCAGGCCGAGACCACCAGCCGCCTGCTCT--CGGGGT-TCCTCTTAATCTCTTCGAT 147221 |||||||| | | | || | | || |||| | | || ||| | | | | | Sbjct 46300 ATTCCAGGCACTCATAATGATACGGC-GATCGTACGGGCTGTGCT-TTAGTTTGTGCACT 46243 Query 147222 AACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCC-CGCAGTCCACGTACC 147280 | | | | |||||| || ||||||||||| ||||| ||| |||| || ||||| Sbjct 46242 ACCTCGGC-CAGCTGATCGACGCCCTGGCCGGTGTAGTCGGTCTGCGCA-TCGACGTATT 46185 Query 147281 TGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCC 147329 ||| |||||||| | |||||||||||||||||| || ||||||||||| Sbjct 46184 CGGCGCCAAAGTGGCGCCACTGGAAGCCGTACACGGGGCCCAGGTCGCC 46136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583471115316000