Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq1092 233 3e-55
seq1595 100 4e-15
>seq1092
Length=189081
Score = 233 bits (258), Expect = 3e-55
Identities = 364/509 (72%), Gaps = 16/509 (3%)
Strand=Plus/Minus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| |||||||||||||| ||||| ||||| ||||||||| | ||||
Sbjct 137794 GATCTGGCAAATGTAC-AAAAAGGCCGAGGCGTCCTTCTGGACTGCCGAGGAGATTGACC 137736
Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891
| | ||| | | ||||| ||| ||| | | ||||| | ||||||
Sbjct 137735 TGTCCAAGGACCTGCACGACTGGAACAACCGCATGAACAAGGACGAAAAGTACTTCATCT 137676
Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951
|||||| || ||||| ||| ||||| || ||||| || ||||||||||| ||
Sbjct 137675 CGCACGTGCTGGCCTTCTTT-GCCGCGTCGGACGGCATTGTCAACGAGAACCTGGTCGAG 137617
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
||||| | |||||||| | || ||||| || | || ||||| || ||||||
Sbjct 137616 CGCTTCTCGGGCGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTTCAGATCATG 137557
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071
|| || ||||||||||| || || |||||||| ||||| ||||| ||| ||||||| ||
Sbjct 137556 ATGGAGAACATCCACTCCGAGACATACTCGCTGCTGATTGACACGTACATCAAGGAGCCC 137497
Query 1456072 GTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCC 1456131
| | || | |||| ||| |||||| || || | || | | | ||||||
Sbjct 137496 GCCCAGCGCAGCTACCTGTTTAACGCCATTGATACTATTCCCTGCATCCGCCGCAAGGCC 137437
Query 1456132 GACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCG 1456188
|||||||| | |||||||| | || | ||| ||||| ||||||| | || || |
Sbjct 137436 GACTGGGCCCTCAAGTGGATTGCCGACCACGAG----TCGAC-CTTTGCCCAACGTCTGG 137382
Query 1456189 TCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGC-GCCATCTTTTGG 1456246
| | |||||||| |||||| |||||||| ||||||||| | | ||| |||||||||||
Sbjct 137381 TGGCCTTTGCCGCCGTCGAAGGCATCTTCTTCTCGGGC-GCCTTTGCTTCCATCTTTTGG 137323
Query 1456247 CTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
|| |||||||| ||||||||||| ||
Sbjct 137322 CTGCGCAAGCGCGGTCTCATGCCCGGCCT 137294
Score = 122 bits (134), Expect = 1e-21
Identities = 226/325 (70%), Gaps = 10/325 (3%)
Strand=Plus/Minus
Query 1456452 TGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCGTCGACCGACG 1456511
||||| ||||||||||| ||||||| | || | | ||||||| | | | | |
Sbjct 137255 TGCACACAGACTTTGCCTGCCTGCTCTTCTCG---CACCTCAACAACCGCCCCAGCAAGA 137199
Query 1456512 TGCCCA---AGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGT 1456568
|| | || | |||||| ||| || |||| || || || ||||| | | |||
Sbjct 137198 AGCTGATTGAGGAAATCATCACCGACGCTGTCGCCATTGAAAAGGAGTTCTTGACCGACG 137139
Query 1456569 CGCTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTT 1456628
| ||||| || || |||||||||||||| | || ||| ||||||||||| |||
Sbjct 137138 CCCTGCCCTGCGCTCTGCTCGGCATGAACGCCGAC-CTGATGAAGCAGTACATTGAGTTT 137080
Query 1456629 TGTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACC 1456688
|| |||||||| ||||| | || |||||| || | ||| |||||| | ||||||
Sbjct 137079 -GTTGCCGACCGTCTGCTGGTCGCCCTCGGCAACGAA-AAGGTCTACCGCTCCACCAACC 137022
Query 1456689 CGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG 1456748
| || | |||||| |||||||||| |||||||||||||| |||||| || |
Sbjct 137021 CCTTTGACTTCATGGAGAACATCTCGCTCGGCGGCAAGACCAACTTCTTCGAGAAGCGTG 136962
Query 1456749 T-GGCGAGTACGCCAAGGCCGGCGT 1456772
| ||||| ||| |||||||| ||
Sbjct 136961 TCGGCGACTACCAAAAGGCCGGTGT 136937
>seq1595
Length=166483
Score = 100 bits (110), Expect = 4e-15
Identities = 198/293 (68%), Gaps = 0/293 (0%)
Strand=Plus/Plus
Query 332810 ACCTTTTCGGCGGCGACAATCTCGCGCAGGCGACCGGCGATTTGGGCGTCAGTGAGGCGC 332869
|||||||| || ||| |||| | ||| || | | | || |||| || || |||
Sbjct 47890 ACCTTTTCTGCCTCGATGATCTGGAGCAACCGTTTGACCACCTGTTCGTCTGTCAGACGC 47949
Query 332870 ACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTG 332929
| | ||||| || || |||||| |||||| | || |||| | | ||| ||||
Sbjct 47950 GCGTACCGCAGAATAGCGCAACGGGACTGCAGCGGTTCAATGATCTTGTTGGACTGGTTG 48009
Query 332930 CAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGT 332989
|| || | |||||| || || || |||| | ||||||| || || ||||| |||
Sbjct 48010 CATGCAAAGGCAAAGCGGGTGGTGTTGGAGTAAATTTCCATTGTGCGGCGCAGGGCTTGT 48069
Query 332990 TGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTGC 333049
||||| | | || | ||||||| ||||||||||| || | ||||||||| |||||
Sbjct 48070 TGGGCACCAGATGTCATCGAGTCGGCTTCGTCGAGGATAATCAGCTTGTGGCGGCCGTGG 48129
Query 333050 GGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTGCGCACGACGTC 333102
|| ||| || ||||| ||| | ||||| |||||||| |||||
Sbjct 48130 GGGAGAGTGACTTTTTTCTGGGCAAAGGCCTTGATTCGGTTGCGCACAACGTC 48182
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177587913995030
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |