Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq2283 118 1e-21 seq335 109 6e-19 seq1473 104 2e-17 >seq2283 Length=86879 Score = 118 bits (130), Expect = 1e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| || ||||| || ||||| ||||| || |||||||||||| | ||| | Sbjct 41329 AGACGCAGAACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGG 41270 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| || || || ||||||| |||||||| || || || ||||| || Sbjct 41269 CCATCCTCCAGCTGCTTACCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCC 41210 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || || || ||| | || ||||| |||||||| || ||||| Sbjct 41209 TTATCCTGGATCTTCGACTTCACATTGTCGATGGTATCGGAGGATTCCACCTCAAGAGTG 41150 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| | ||| || ||||| |||||||| Sbjct 41149 ATTGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 41112 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || || || ||||| || ||||||||||| | ||| | || || Sbjct 41092 ACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCC 41033 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || || ||||||| ||||||||| || || || || || || || || || Sbjct 41032 AGCTGCTTACCCGCGAAAATCAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGG 40973 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | || || ||||| || || |||||||| ||||| || Sbjct 40972 ATCTTGGACTTGACGTTGTCAATGGTATCCGACGACTCGACTTCGAGAGTGATGGTCTTG 40913 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| | ||| || ||||| |||||||| Sbjct 40912 CCGGTAAGAGTCTTGACGAAGATTTGCAT 40884 Score = 102 bits (112), Expect = 8e-17 Identities = 142/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || || || ||||| || ||||||||||| | ||| | ||| || Sbjct 40864 ACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCGTCCTCC 40805 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || ||||| |||| ||||||||| || || || ||||| || || || || Sbjct 40804 AGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTATCCTGG 40745 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | || || ||||| || || |||||||| ||||| || Sbjct 40744 ATCTTGGACTTGACGTTGTCAATGGTATCCGACGACTCGACTTCGAGAGTGATGGTCTTG 40685 Query 134685 CCGGTTAAAGTTTTAACGA 134703 ||||| | || || |||| Sbjct 40684 CCGGTGAGGGTCTTGACGA 40666 >seq335 Length=221524 Score = 109 bits (120), Expect = 6e-19 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 134513 TAGCGTGGATT--CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 ||||||||| | |||| || ||||||||||| | ||| | || || ||||| Sbjct 117036 TAGCGTGGACTGACCTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCATCCTCCAGCTGC 117095 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 ||||| || || |||| ||||||||| || || || ||||| || || || ||||| || Sbjct 117096 TTGCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTG 117155 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 ||||| ||| | ||||| || || || || ||||| ||||| || ||||| || Sbjct 117156 GACTTGACATTGTCGATAGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTC 117215 Query 134691 AAAGTTTTAACGAAAATTTGCATTTTG 134717 | || || |||||||| ||||| ||| Sbjct 117216 AGGGTCTTGACGAAAATCTGCATCTTG 117242 >seq1473 Length=183801 Score = 104 bits (114), Expect = 2e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583 |||| ||||||||||||||| | |||| | || || ||||| ||||| ||||| | Sbjct 105034 CCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGA 105093 Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643 ||| ||||||||| || || || ||||| || || || || || || ||||| || Sbjct 105094 TCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 105153 Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 | | ||||| || || || || || || |||||||| ||||| || | || || |||| Sbjct 105154 CGATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 105213 Query 134704 AA 134705 || Sbjct 105214 AA 105215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505383775033800