Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq1750 111 2e-19
seq1092 96.9 5e-15
>seq1750
Length=138661
Score = 111 bits (122), Expect = 2e-19
Identities = 449/706 (64%), Gaps = 10/706 (1%)
Strand=Plus/Minus
Query 69538 TCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACT 69597
||| ||| ||||| || || || |||||||||| | ||| || | | || ||
Sbjct 35654 TCAGCCAGGCCAGGGCACTCGTTGGGACACATCAGGGTCCAGTTCTCGTTCTTCTCGACA 35595
Query 69598 CGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCT 69657
|| ||||| || | ||||||||||| ||||||| || || || | || | ||
Sbjct 35594 CGCTTCATGAACATGTCGGGAATCCACAGAGCTAGGAACAGGTCACGGGCGCGGACCTCC 35535
Query 69658 TCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCT 69717
|| || || ||| || || || || ||||| | | ||| | ||||| || ||
Sbjct 35534 TCCTTACCATGATTCTTGCGCAGGTCAAGGAACTCAAACACATCGGCGTGCCACGGCTCC 35475
Query 69718 AGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTG 69777
|| || || || | | || || || || || || ||||| || | || | |||||||
Sbjct 35474 AGGTAAATGGCAAAAGCACCAGGGCGCTTGTTGCCGCCCTGGTCGACATAGCGGGCAGTG 35415
Query 69778 TTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATA 69837
|| || | || | |||||| || ||||| || || || |||| || || |||| |||
Sbjct 35414 TTGTTGAACACGCGCAGCATGGGGATAATGCCGTTGGAGGTACCGTTGGTACCAGCAATG 35355
Query 69838 TAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAG 69897
|| || | ||||| ||| || | || || || || || ||||| || ||
Sbjct 35354 TACGAGCCAGTGGCGCGGATACGGTGAACATTGAGGCCGATACCACCAGCCATCTTGGAA 35295
Query 69898 ATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTA 69957
|| | ||||||| || | || || || || || || || || || |||||| |
Sbjct 35294 ATCATAGCACAAGTCTTGAGAGTATCGTAAATGCCTTCAATCGAGTCCTCCTTCATGTCA 35235
Query 69958 AGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGAT 70017
| ||||| || |||| || || ||| || || || || | || || ||
Sbjct 35234 ACCAGAAAGCAAGATGACAGCTGGGCCTGAGGAGTACCAGCGTTGAACAGAGTGGGCGAG 35175
Query 70018 GCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAAT-----AGCTGATTCTA 70072
|||||||| || | || || | || ||||| || ||||| | || |||
Sbjct 35174 GCGTGAGTAAAGAACTTGCTCGACATGAGGTTGTACGTCTCAATGACGCGGTCGACTCTG 35115
Query 70073 TATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCG 70132
| ||| | |||| || | || |||||||| | ||| ||||| || || || ||
Sbjct 35114 TCACCC-CAGATG----CCAACAGCCACACGCATAATCATGTGCTGGGGACGCTCGACAA 35060
Query 70133 TTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGT 70192
| || | | |||| |||||| || ||||| || || || ||||| || | ||
Sbjct 35059 TCTTGCCGTCCAACTTCAGCAGGTACGAACGCTCCAGGGTCTTGAAGCCAAAGTACTGGT 35000
Query 70193 ATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTT 70238
| |||||| | ||||| | ||| |||| | || | ||||||
Sbjct 34999 AGTTAAAGTCACGATCGTACACAATGGCAGAGTCCAGCTCATCCTT 34954
>seq1092
Length=189081
Score = 96.9 bits (106), Expect = 5e-15
Identities = 358/559 (64%), Gaps = 8/559 (1%)
Strand=Plus/Plus
Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675
|||||| ||||| || |||||||| || | ||| | ||||| ||||| || ||
Sbjct 137236 GCAGGCAAAGTCTGTGTGCAGGCCCTCGTCGCGGGAAATCAGCTCGTTGGAAAAGGTCAG 137295
Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735
|| ||||| ||||| ||||| |||||||| |||| |||||| | || || |||||
Sbjct 137296 GCCGGGCATGAGACCGCGCTTGCGCAGCCAAAAGATGGAAGCAAAGGCGCCCGAGAAGAA 137355
Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTAT---G 39792
||||||||| || || ||||| || || || | | | | | | || | |
Sbjct 137356 GATGCCTTCGACGGCGGCAAAGGCCACCAGACGTTGGGCAAAGGTCGACTCGTGGTCGGC 137415
Query 39793 TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 39852
|||||||| | ||||| || || || | || || || || || || || ||
Sbjct 137416 AATCCACTTGAGGGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTATCAATGGCGTT 137475
Query 39853 AAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACAT 39912
||| || || | | || || | || || || || | ||| || |
Sbjct 137476 AAACAGGTAGCTGCGCTGGGCGGGCTCCTTGATGTACGTGTCAATCAGCAGCGAGTATGT 137535
Query 39913 TTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAAT 39972
|| || |||||||| || ||| |||||||| ||||| || || | || || | ||
Sbjct 137536 CTCGGAGTGGATGTTCTCCATCATGATCTGAAAGCCGTAGAAGCAGCGGGCCTCGGGGAT 137595
Query 39973 TTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGC 40032
|| ||||| | || | || ||| || || || || || || || |||||
Sbjct 137596 CTGGACCTCGCCCGAGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGACGCGGC 137655
Query 40033 AAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT----TTATTCC 40088
||| || |||| || || || || || ||||| || ||| || || ||||
Sbjct 137656 AAAGAAGGCCAGCACGTGCGAGATGAAGTACTTTTCGTC-CTTGTTCATGCGGTTGTTCC 137714
Query 40089 AGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCT 40148
|||| | | || || || | || | || || || ||||| || |||||||| ||||
Sbjct 137715 AGTCGTGCAGGTCCTTGGACAGGTCAATCTCCTCGGCAGTCCAGAAGGACGCCTCGGCCT 137774
Query 40149 TTTTGTACATGTTCCATAT 40167
|||||||||| | ||| ||
Sbjct 137775 TTTTGTACATTTGCCAGAT 137793
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686888922576600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |