Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq1750 185 1e-41
seq1654 91.5 2e-13
>seq1750
Length=138661
Score = 185 bits (204), Expect = 1e-41
Identities = 898/1406 (64%), Gaps = 53/1406 (4%)
Strand=Plus/Minus
Query 110706 GGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGG 110765
|||| ||||| | ||||| || |||||||| ||||| || |||| || || | |||
Sbjct 36451 GGTAAATGTTGGAAGTGTACGGCTCAAAGCACTCATTGTTGCCCAGAATCTGCGACGTGC 36392
Query 110766 AGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTT 110825
||| || ||||| || |||| || || ||| || | ||| | || |||||| | |
Sbjct 36391 TGGCCGTAGGCATGGGAGCCAGCAGCAGCGAGTTGCGCACACCGTGCTGCTTGATCTGCT 36332
Query 110826 CCTTGAGAACATCCCAGTCGTAGTTGAG-CTTGGTTTCACCTTCCCACATGTCAAACTGA 110884
||||||| | ||||||| || | || || | || |||| |||||||||||||
Sbjct 36331 CCTTGAGCGAAGCCCAGTCCCAGAGGTCACTGGGAGTGACATTCC-ACATGTCAAACTGC 36273
Query 110885 AGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCC 110944
|| | || || || | || |||||||| |||| || | || | | | ||
Sbjct 36272 AGGATGCCCTGCGAAACAGGCGAACCCTCGTAGGTCGAGTACGTGCCCTCCTCCTTGGCA 36213
Query 110945 AATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATC 111004
| || | |||| ||||| ||||| || || || |||||||| ||| || | |
Sbjct 36212 ATCTCCATGGACGCCGTCAGGGCAGCGTGGTAAATAGTCTCAAAGATCTGAGTGTTGAGC 36153
Query 111005 TCCTTGGCTTCATCTGAATCAAATG-----CGTAGCGGCACAAAATAAATACATCCGCGA 111059
| || || | || ||||| | ||||| | || ||| |||| || |
Sbjct 36152 TTGCGAGCCTCGGCCGACTCAAACGGCATACGTAGAGCCAAAAAGG-----CATCAGCCA 36098
Query 111060 GACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA- 111118
|||| || ||||| | |||||||| | ||| ||||| || || | || |||
Sbjct 36097 GACCCTGGACACCAACGCCAATAGGACGGTGGCGCATGTTGCTGTTGTGTGC---CTCGG 36041
Query 111119 --ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 111176
|| || || ||| ||||||| ||||| ||||| || | ||| ||||
Sbjct 36040 GCACAGGGTAGTGATTGACATCAATGATGCGGTTCAGATTGCGCACCACCACCTTGGTGA 35981
Query 111177 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTG---ACATACTTTGGAA 111233
|| || || || | | || | ||| |||| | | ||| || ||| |
Sbjct 35980 CATCGTGCAGCTTCTGGAAGTCGTA---GCGGTTCTCGCTGTAGTCAACAAACGATGGCA 35924
Query 111234 GGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTT 111293
| || | || |||| ||||| ||||| |||||| | |||||| | ||| |
Sbjct 35923 GCGCCAGCGAGGCCAGGTTGCACACAGCAACCTCATCAGGGGCACAGTACTCGATAATCT 35864
Query 111294 CTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGC 111353
| || || | |||||| || ||| || |||| |||||||||||| ||||| |||||
Sbjct 35863 CAGTGCACAGGTTGGAGCTGCGAATGGTACCCAGATTCTTTTGGTTGCTCTTGCGGTTGC 35804
Query 111354 ACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCT 111413
| |||||||| ||||| | || | || ||||| ||||| | | | ||| || |
Sbjct 35803 AGTGGTCCTTGTACAGCATAAACGGGTTGCCAGTCTCGGTCTGGGCCTCCAAAATGGCAT 35744
Query 111414 TCCA-AACATCGGCGGCTGGTAC-AATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGT 111471
||| | | || | | || | | | || || | || |||||| ||||||||||
Sbjct 35743 ACCACAGCTTCTGGGCCTTGACCGACTGCCG--ACCACGGCCCTCCTTCTCGTACTTTTC 35686
Query 111472 GTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACA 111531
||| || || ||||| ||||| || ||| | || || || || || |||||
Sbjct 35685 GTACAGAGCCTCAAATTCCTCGCCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGACA 35626
Query 111532 GAAAAGAGACCA-TTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACA 111590
| || | ||| || | ||| ||| || ||||||||||| | ||| ||||||||||
Sbjct 35625 CATCAGGGTCCAGTTCTCGTTCTT-CTCGACACGCTTCATGAACATGTCGGGAATCCACA 35567
Query 111591 GGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAA 111650
| | | || || || | || |||| || | ||| || || || | ||||
Sbjct 35566 GAGCTAGGAACAGGTCACGGGCGCGGACCTCCTCCTTACCATGATTCTTGCGCAGGTCAA 35507
Query 111651 GGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC------CT 111704
||||||| | | ||| |||||||| ||||| || || | || | || || ||
Sbjct 35506 GGAACTCAAACACATCGGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACCAGGGCGCT 35447
Query 111705 T-TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGA 111763
| | | ||||| || | |||||||| || ||| ||| || ||||| ||||| ||
Sbjct 35446 TGTTGCCGCCC----TGGTCGACATAGCGGGCAGTGTTGTTGAACACGCGCAGCATGGGG 35391
Query 111764 ATAATACCATCTGATTGACCATTTGTCCCCCGAA--TACGAGATTTATTGGCTCTCACAT 111821
||||| || | || ||| || || || || |||||| | |||| | | |
Sbjct 35390 ATAATGCCGTTGGAGGTACCGTTGGTACCAGCAATGTACGAG--CCAGTGGCGCGGATAC 35333
Query 111822 CATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAG 111881
|| | | | || ||||| |||||| ||| || || ||||| | | ||||
Sbjct 35332 GGTGAACATTGAGGCCGATACCACCAGCCATCTTGGAAATCATAGCACAAGTCTTGAGAG 35273
Query 111882 TTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCT 111941
| | || || || | || ||||||||||| || | | || |||||| |||| ||
Sbjct 35272 TATCGTAAATGCCTTCAATCGAGTCCTCCTTCATGTCAACCAGAAAGCAAGATGACAGCT 35213
Query 111942 GCGGTCT-TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG- 111999
| || || || |||||||| ||||| || || || | |||||| | | | | ||||
Sbjct 35212 G-GGCCTGAGGAGTACCAGCGTTGAACAGAGTGGGCGAGGCGTGA--GTAAAGAACTTGC 35156
Query 112000 -GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCT-TCCCCGTGGATGCCGATT 112057
||||| || ||| ||||| | ||| || | ||| || || |||||| |
Sbjct 35155 TCGACATGAGGTTGTACGTCTCAATGACGCGGTCGA-CTCTGTCACCCCAGATGCCAACA 35097
Query 112058 GCGACCCGCATGAACATGTACTGTGG 112083
|| || ||||| | ||||| ||| ||
Sbjct 35096 GCCACACGCATAATCATGTGCTGGGG 35071
>seq1654
Length=5849
Score = 91.5 bits (100), Expect = 2e-13
Identities = 203/301 (67%), Gaps = 4/301 (1%)
Strand=Plus/Minus
Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 11689
|| |||||||| ||||| |||| || || || ||| | ||| || | |||| ||
Sbjct 1857 GCGTCAATCTCGTCAATAAAGATGATGCACGGCGCATTCTTGCGTGCCGTGGCAAACAGG 1798
Query 11690 TCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCG--GCAGAGC 11747
|| || |||| | || ||||| ||||||||||| ||||| | | | || || |
Sbjct 1797 TCCCGCACCCGCGATGGGCCAACACCTACAAACATCTCGACAAACTCGGAGCCGCTGA-C 1739
Query 11748 ACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCG 11807
||| | ||| || || || || || || |||| ||| || || ||||||||||
Sbjct 1738 GCTGAA-GAACGGCACGCCCGACTCGCCTGCCGTGGCCTTGGCCAGCAGCGTCTTTCCCG 1680
Query 11808 TACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACCACTTCCAAAATATC 11867
| || || ||||| |||| ||| || || ||||||||||| || | | | |
Sbjct 1679 TTCCGGGAGGACCCGACAGAATGGCACCGCGTGGGATCTTGGCGCCCAGGCGCACAAACT 1620
Query 11868 TCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCCGCGTCAATCC 11927
||||||| | |||||| || | ||||| ||| | ||| | |||||| |||| || |
Sbjct 1619 TCTCGGGCTTCTTGAGGAACTGCACAAACTCCATGATTTCCACCTTGGCCTCGTCCATGC 1560
Query 11928 C 11928
|
Sbjct 1559 C 1559
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628013826324000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |