Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq1750 208 9e-49
seq1654 95.1 1e-14
seq1092 86.0 7e-12
>seq1750
Length=138661
Score = 208 bits (230), Expect = 9e-49
Identities = 903/1404 (64%), Gaps = 53/1404 (4%)
Strand=Plus/Plus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACA---TTGATTCT 104278
|| ||| ||||| | ||||| ||||| | || || ||||| |||| | ||
Sbjct 35071 CCCCAGCACATGATTATGCGTGTGGCTGTTGGCATC--TGGGGT-GACAGAGTCGACCGC 35127
Query 104279 GTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCC 104336
||| | ||||| ||| || ||||| |||| | | | | |||||| | || || |
Sbjct 35128 GTCATTGAGACGTACAACCTCATGTCGAGCAAGTTCTTTAC--TCACGCCTCGCCCACTC 35185
Query 104337 TCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGG 104396
| ||||| |||||||| || |||| |||| |||||| || | | || ||||
Sbjct 35186 TGTTCAACGCTGGTACTCCTCAGGCCCAGCTGTCATCTTGCTTTCTGGTTGACATGAAGG 35245
Query 104397 AGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGG 104456
||||||| || | || || || | ||||| | | ||||| || || ||| ||
Sbjct 35246 AGGACTCGATTGAAGGCATTTACGATACTCTCAAGACTTGTGCTATGATTTCCAAGATGG 35305
Query 104457 CTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGG 104514
|||| ||||| || | | | || | | | |||| | |||||| || ||
Sbjct 35306 CTGGTGGTATCGGCCTCAATGTTCACCGTATCCGCGCCACTGG--CTCGTACATTGCTGG 35363
Query 104515 GACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 104574
|| || ||| || | || ||||| || ||||| ||||| || ||| ||| || ||
Sbjct 35364 TACCAACGGTACCTCCAACGGCATTATCCCCATGCTGCGCGTGTTCAACAACACTGCCCG 35423
Query 104575 CTATGTAAATCAAGCTGGGCGTCGA-AAG------GGATCTATCGCAGTCTATCTTGAGC 104627
|||||| | || ||||| | | ||| || || | || | || || ||||
Sbjct 35424 CTATGTCGACCA----GGGCGGCAACAAGCGCCCTGGTGCTTTTGCCATTTACCTGGAGC 35479
Query 104628 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG 104687
| |||||||| ||| | | ||||||||||| |||| || || ||| | |||||||
Sbjct 35480 CGTGGCACGCCGATGTGTTTGAGTTCCTTGACCTGCGCAAGAATCATGGTAAGGAGGAGG 35539
Query 104688 CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 104747
|| ||| || || ||| ||||| |||||||| || | ||||||||| | || |
Sbjct 35540 TCCGCGCCCGTGACCTGTTCCTAGCTCTGTGGATTCCCGACATGTTCATGAAGCGTGTCG 35599
Query 104748 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCG 104807
|| ||| | || ||| | || | ||||| || || ||||| || | || |
Sbjct 35600 AGAAGAACGAGAACTGGACCCTGATGTGTCCCAACGAGTGCCCTGGCCTGGCTGACTGCT 35659
Query 104808 TGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC-G 104866
|| ||||| ||||| || || ||| ||||||||| |||| ||| | | | | || |
Sbjct 35660 ACGGCGAGGAATTTGAGGCTCTGTACGAAAAGTACGA-GAAGGAGGGCCGTGGTCGGCAG 35718
Query 104867 ACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTAC 104925
|||| | || | || | ||||| | || ||| | || | || ||||||||||| |
Sbjct 35719 TCGGT-CAAGGCCCAGAAGCTGTGGTATGCCATTTTGGAGGCCCAGACCGAGACTGGCAA 35777
Query 104926 ACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 104985
|| | ||||| ||||| ||| ||| |||| ||||| || ||||||||| |||||
Sbjct 35778 CCCGTTTATGCTGTACAAGGACCACTGCAACCGCAAGAGCAACCAAAAGAATCTGGGTAC 35837
Query 104986 GATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGC 105045
|| || ||||| || || || || || | || | | | |||||| ||
Sbjct 35838 CATTCGCAGCTCCAACCTGTGCACTGAGATTATCGAGTACTGTGCCCCTGATGAGGTTGC 35897
Query 105046 TGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGACAT 105104
|||||| ||||| || || | || || || || ||| || | ||| || || | |
Sbjct 35898 TGTGTGCAACCTGGCCTCGCTGGCGCTGCCATCGTTTGTTGACTACAGCGAGAACCGC-T 35956
Query 105105 TTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTA 105164
|| | | || || ||||| || || || || || || ||| | | |
Sbjct 35957 ACGACTTCCAGAAGCTGCACGATGTCACCAAGGTGGTGGTGCGCAATCTGAACCGCATCA 36016
Query 105165 TTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTC 105221
||||| ||| ||||| || ||| || | || || ||| | |||||||
Sbjct 36017 TTGATGTCAATCACTACCCTGTGCCCGAG---GCACACAACAGCAACATGCGCCACCGTC 36073
Query 105222 CAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG-----C 105276
| ||||| | ||||| |||||||| || |||| || |||| | | ||| |
Sbjct 36074 CTATTGGCGTTGGTGTCCAGGGTCTGGCTGATGCCTT-----TTTGGCTCTACGTATGCC 36128
Query 105277 ATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGC 105336
||||| || | ||| || | |||| | | || |||||||| || || |||||
Sbjct 36129 GTTTGAGTCGGCCGAGGCTCGCAAGCTCAACACTCAGATCTTTGAGACTATTTACCACGC 36188
Query 105337 CGCTCTTGAGGCGAGTTCA--GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAG 105394
|| | ||| | | || || ||| | || ||| || || | || |||| |||
Sbjct 36189 TGC-CCTGACG-GCGTCCATGGAGATTGCCAAGGAGGAGGGCACGTACTCGACCTACGAG 36246
Query 105395 GGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAG-CT 105453
||||| || | ||| || || | || || ||||| |||| |||| || | || ||
Sbjct 36247 GGTTCGCCTGTTTCGCAGGGCATCCTGCAGTTTGACATGT-GGAATGTCACTCCCAGTGA 36305
Query 105454 TCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCT 105513
| || ||||||| | |||||||| | |||||| || | ||| | || ||| ||
Sbjct 36306 CCTCTGGGACTGGGCTTCGCTCAAGGAGCAGATCAAGCAGCACGGTGTGCGCAACTCGCT 36365
Query 105514 CCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 105573
|| ||||||| ||||| || ||| ||| | || || |||| || ||||| |||||
Sbjct 36366 GCTGCTGGCTCCCATGCCTACGGCCAGCACGTCGCAGATTCTGGGCAACAATGAGTGCTT 36425
Query 105574 TGAACCCTACACGACGAACATCTA 105597
||| || ||||| | ||||| ||
Sbjct 36426 TGAGCCGTACACTTCCAACATTTA 36449
>seq1654
Length=5849
Score = 95.1 bits (104), Expect = 1e-14
Identities = 158/226 (70%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 9703 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 9762
||| |||||||| ||||| |||| |||||| || ||| | ||| || |||| ||
Sbjct 1858 GGCGTCAATCTCGTCAATAAAGATGATGCACGGCGCATTCTTGCGTGCCGTGGCAAACAG 1799
Query 9763 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG-GAAC 9821
||||| || ||| | ||| ||||| ||||||||||| ||||| | | | || ||
Sbjct 1798 GTCCCGCACCCGCGATGGGCCAACACCTACAAACATCTCGACAAACTCGGAGCCGCTGAC 1739
Query 9822 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9881
| || ||| || || || || || || |||| ||| || || ||||| ||||
Sbjct 1738 GCT-GAAGAACGGCACGCCCGACTCGCCTGCCGTGGCCTTGGCCAGCAGCGTCTTTCCCG 1680
Query 9882 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927
| || || ||||| || | |||||| ||||| |||||||||||
Sbjct 1679 TTCCGGGAGGACCCGACAGAATGGCACCGCGTGGGATCTTGGCGCC 1634
>seq1092
Length=189081
Score = 86.0 bits (94), Expect = 7e-12
Identities = 117/161 (73%), Gaps = 2/161 (1%)
Strand=Plus/Minus
Query 94796 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855
||||||| | || || | || ||||| || || || ||||||||||| || |||
Sbjct 137399 CCTTTGCCCAACGTCTGGTGGCCTTTGCCGCCGTCGAAGGCATCTTCTTCTCGGGCGCCT 137340
Query 94856 TCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 94914
| ||| | || | |||||| ||||| ||||||||||| || || ||| ||||||
Sbjct 137339 T-TGCTTCCATCTTTTGGCTGCGCAAGCGCGGTCTCATGCCCGGCCTGACCTTTTCCAAC 137281
Query 94915 GAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
||||| || || || |||||||| || ||| ||| |||||
Sbjct 137280 GAGCTGATTTCCCGCGACGAGGGCCTGCACACAGACTTTGC 137240
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583243921890600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |