Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq1750 302 5e-77
seq1092 150 2e-31
seq2261 136 4e-27
>seq1750
Length=138661
Score = 302 bits (334), Expect = 5e-77
Identities = 523/750 (70%), Gaps = 14/750 (2%)
Strand=Plus/Plus
Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGAC-GACTACACGCGTGTCCGTGAGACGTACGA 53253
||||| || || | || ||| |||||| || | || || ||| |||||||||| |
Sbjct 35086 ATGCGTGTGGCTGTTGGCATCTGGGGTGACAGAGTCGAC-CGCGTCATTGAGACGTACAA 35144
Query 53254 CTTAATG---AGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTAC 53310
| | ||| ||| |||| |||||| |||||| |||| || |||||||||||||||||
Sbjct 35145 CCTCATGTCGAGC---AAGTTCTTTACTCACGCCTCGCCCACTCTGTTCAACGCTGGTAC 35201
Query 53311 GAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGG 53370
||| | ||| |||| ||||| ||||| | |||||||| |||||||| || ||
Sbjct 35202 TCCTCAGGCCCAGCTGTCATCTTGCTTTCTGGTTGACATGAAGGAGGACTCGATTGAAGG 35261
Query 53371 CATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTAT 53430
||| ||||| || |||||| ||||| || |||||| | | ||||||||||| |
Sbjct 35262 CATTTACGATACTCTCAAGACTTGTGCTATGATTTCCAAGATGGCTGGTGGTATCGGCCT 35321
Query 53431 CCACTGCTCGAACGT--CCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCC 53488
| | || || | ||| ||| || | ||| | || || || ||||| | ||
Sbjct 35322 CAA-TGTTC-ACCGTATCCGCGCCACTGGCTCGTACATTGCTGGTACCAACGGTACCTCC 35379
Query 53489 GATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGT 53548
| || || | || ||||| ||||| ||||||||||| ||||| || ||| |||||||
Sbjct 35380 AACGGCATTATCCCCATGCTGCGCGTGTTCAACAACACTGCCCGCTATGTCGACCAGGGC 35439
Query 53549 GGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATG 53608
|| |||||| || | || ||||| ||||| ||||||||||||||||| | |
Sbjct 35440 GGCAACAAGCGCCCTGGTGCTTTTGCCATTTACCTGGAGCCGTGGCACGCCGATGTGTTT 35499
Query 53609 GAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTT 53668
||||| || || ||||| |||||| ||| | || ||| | ||| ||||||||||||
Sbjct 35500 GAGTTCCTTGACCTGCGCAAGAATCATGGTAAGGAGGAGGTCCGCGCCCGTGACCTGTTC 35559
Query 53669 ACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTAC 53728
||||||||||||||| ||| | |||||| | || |||||| ||||| | ||| |
Sbjct 35560 CTAGCTCTGTGGATTCCCGACATGTTCATGAAGCGTGTCGAGAAGAACGAGAACTGGACC 35619
Query 53729 CTGATGTGCCCGAACGAGTGCCCCGGCCT-CCAGGGTGTCTACGGTGAGGAGTTTAACGA 53787
|||||||| || ||||||||||| ||||| | | || |||||| ||||| ||| | |
Sbjct 35620 CTGATGTGTCCCAACGAGTGCCCTGGCCTGGCTGACTG-CTACGGCGAGGAATTTGAGGC 35678
Query 53788 GATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGT 53847
|||| | ||||| ||||||| | || ||||||||| | || |
Sbjct 35679 TCTGTACGAAAAGTACGAGAAGGAGGGCCGTGGTCGGCAGTCGGTCAAGGCCCAGAAGCT 35738
Query 53848 ATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGA 53907
||| |||| || | || |||| ||||| || | |||| ||| ||||||||
Sbjct 35739 GTGGTATGCCATTTTGGAGGCCCAGACCGAGACTGGCAACCCGTTTATGCTGTACAAGGA 35798
Query 53908 TTCGGTCAACGAGAAGAGCAACCAGAAGAA 53937
|||| ||||||||||| |||||
Sbjct 35799 CCACTGCAACCGCAAGAGCAACCAAAAGAA 35828
Score = 111 bits (122), Expect = 2e-19
Identities = 142/196 (72%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTG 55787
|||||| | ||| ||| |||||||||||| | ||| | || | | ||| ||
Sbjct 36602 TCAAGGCTCTGTACAAGACAGTGTGGGAGATTTCGCAGCGCACGGTGGTGCAGATGGCTG 36661
Query 55788 CTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTT 55847
| || |||||||| | ||||||||||| ||||| || ||||| |||| || | |||
Sbjct 36662 CCGACCGTGGTGCCTTTATCGACCAGTCGCAGTCGCTCAACATTCACATGAAGGACCCTA 36721
Query 55848 CACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTA 55907
| ||| |||| | | | ||||||||| ||| |||||| ||| ||||||||||| |
Sbjct 36722 CCATGGGCAAGATTACCAGCATGCACTTTGCCGGCTGGAAGCTGGGTCTCAAGACGGGCA 36781
Query 55908 TGTACTATCTGCGGAC 55923
||||||| ||||| ||
Sbjct 36782 TGTACTACCTGCGTAC 36797
>seq1092
Length=189081
Score = 150 bits (166), Expect = 2e-31
Identities = 552/845 (65%), Gaps = 32/845 (4%)
Strand=Plus/Plus
Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522
|| || ||||| ||||| || || ||||||||||| || | | |||||||||||||||
Sbjct 136952 TAGTCGCCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGCGAGATGTTCTCCATG 137011
Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTCCC--CAAACTGTG-CCATGAGG 74579
|||| || ||||| | | | ||| | ||| || | | | | ||| ||
Sbjct 137012 AAGTCAAAGGGGTTGGTGGAGCGGTAGAC---CTTTTCGTTGCCGAGGGCGACCAGCAGA 137068
Query 74580 CGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTTG 74639
|| || || ||||| | |||||||||| |||| | || | |||||||| || |
Sbjct 137069 CGGTCGGCAACAAACTCAATGTACTGCTTCATCAGGTCGGCGTTCATGCCGAGCAGAGCG 137128
Query 74640 CACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGACAATCTTG 74699
|| ||||| || ||||| | ||||| | || | || ||| || || |
Sbjct 137129 CAGGGCAGGGCGTCGGTCAAGAACTCCTTTTCAATGGCGACAGCGTCGGTGATGATTTCC 137188
Query 74700 TGAATGT-CTT--TGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGC-GTCACGGCAAA 74755
| ||| ||| || |||| || | | ||||| ||| | ||| | || ||||||
Sbjct 137189 TCAATCAGCTTCTTGCTGGGGCGGTTGT---TGAGGTGCGAGAAGAGCAGGCA-GGCAAA 137244
Query 74756 CTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCAT 74815
|| ||| ||| || || | | |||| || || ||||| | ||||| |||||
Sbjct 137245 GTCTGTGTGCAGGCCCTCGTCGCGGGAAATCAGCTCGTTGGAAAAGGTCAGGCCGGGCAT 137304
Query 74816 AAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTC 74875
|| || ||||| || ||||||||||| | |||| || |||||||||||||||
Sbjct 137305 GAGACCGCGCTTGCGCAGCCAAAAGATGGAAGCAAAGGCGCCCGAGAAGAAGATGCCTTC 137364
Query 74876 GACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATC--GGAAGTC-ATCCAAGT 74932
||| |||||||| || || ||||| || || | | || || | | ||||| |
Sbjct 137365 GACGGCGGCAAAGGCCACCAGACGTTGGGCAAAGGTCGACTCGTGGTCGGCAATCCACTT 137424
Query 74933 CTGAGCCCATTCAGCTTTTCGTTTGACCGCAGGG-ACAGTATCGATCGCTTGGAAGAGGC 74991
| ||||| || || || || || |||||| | |||||| || || | || |||
Sbjct 137425 GAGGGCCCAGTCGGCCTTGCGGCGGA-TGCAGGGAATAGTATCAATGGCGTTAAACAGG- 137482
Query 74992 TTGCCTTCTCT--TCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGA 75049
| || | || |||| ||||||| | | ||||||||| || ||||| ||||| ||
Sbjct 137483 -TAGCTGCGCTGGGCGGGCTCCTTGATGTACGTGTCAATCAGCAGCGAGTATGTCTCGGA 137541
Query 75050 ATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTAC 75109
|| || ||| | | ||| | ||||||| | || ||||| | ||||| ||
Sbjct 137542 GTGGATGTTCTCCATCATGATCTGAAAGCCGTAGAAGCAGCGGGCCTCGGGGATCTGGAC 137601
Query 75110 ATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAA 75169
|| || || | | | | ||||| |||| ||||||||||| ||||| || ||
Sbjct 137602 CTCGCCCGAGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGACGCGGCAAAGAA 137661
Query 75170 AGCCAGTACCATTTTGATAAAGTGGCGCTCATC---GTCAGTGAGTTTGTCCCAATCCTT 75226
||||| || ||| |||| || || || || | |||| ||| || |
Sbjct 137662 GGCCAGCACGTGCGAGATGAAGTACTTTTCGTCCTTGTTCATGCGGTTGTTCCAGTCGTG 137721
Query 75227 CAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAA--ACTCCCAATC-GCCTTTTT 75283
||||||| | || |||||||||||| | |||||||| || || || ||||||||
Sbjct 137722 CAGGTCCTTGGACAGGTCAATCTCCTCGGCAGTCCAGAAGGACGCC---TCGGCCTTTTT 137778
Query 75284 GTACA 75288
|||||
Sbjct 137779 GTACA 137783
>seq2261
Length=86933
Score = 136 bits (150), Expect = 4e-27
Identities = 195/275 (71%), Gaps = 0/275 (0%)
Strand=Plus/Plus
Query 152022 CAAACGCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCC 152081
|| ||||||| ||| || || | ||| |||||| |||||| ||||| || | |||
Sbjct 67885 CAGACGCGTGTGGATATAACGAGCCGAGGCAGCATCCGAGCCACCGGCCAGACGAGATCC 67944
Query 152082 AAACTGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAA 152141
||| | || |||||| ||| ||||| ||||||| ||||| || ||||| ||||
Sbjct 67945 AAAGTTACCGCTGGGCTCCAGGCAGTTGACATTGTTGGAACCCACAAAGTTCTGCGCCAG 68004
Query 152142 ATTCACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGAT 152201
| | ||| || |||||| ||| |||||||| || || ||||| | | | |
Sbjct 68005 ACCAATAATAGTCTGCTGCAGCGACGCCTCACCGTGCTGGTAGGCCGTACGGCCAGATAC 68064
Query 152202 GTATCCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTA 152261
||| || ||||||| |||||||||||||| | | ||| || ||| ||| |||||
Sbjct 68065 GTAACCAGCCAACTCAACCACCTTCATGTCCTTGACAATGTTACTCATGAAACACGCGTA 68124
Query 152262 AATCACCTTGCGCTGGGATGGTTTCAAACCGTCCA 152296
||||||||||||||| || || || |||||||
Sbjct 68125 AATCACCTTGCGCTGACCGGGCTTAAAGCCGTCCA 68159
Score = 113 bits (124), Expect = 5e-20
Identities = 169/238 (71%), Gaps = 4/238 (2%)
Strand=Plus/Plus
Query 117326 GCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTC 117385
||||||||| |||||| || ||||| | || || | || || ||||||| | |||
Sbjct 67913 GCAGCATCCGAGCCACCGGCCAGACGAGATCCAAAGTTACCGCTGGGCTCCAGGCAGTTG 67972
Query 117386 AGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCC 117445
| ||||||| ||||||||||| || |||| | ||| || || || ||||
Sbjct 67973 ACATTGTTGGAACCCACAAAGTTCTGCGCCAGACCAATAATAGTCTGCTGCAGCGACGCC 68032
Query 117446 TCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATG 117505
||||| || || || ||||| | | | ||||| || |||| || | |||||||||||
Sbjct 68033 TCACCGTGCTGGTAGGCCGTACGGCCAGATACGTAACCAGCCAACTCAACCACCTTCATG 68092
Query 117506 TC--TGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTT 117561
|| |||| | ||| || ||| || || ||||||||||||||||||| |||||
Sbjct 68093 TCCTTGAC--AATGTTACTCATGAAACACGCGTAAATCACCTTGCGCTGACCGGGCTT 68148
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547200164937000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |