Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq2283 161 2e-34
seq335 120 7e-22
>seq2283
Length=86879
Score = 161 bits (178), Expect = 2e-34
Identities = 161/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || || |||||||||||||| || || |||| || || |||| || ||
Sbjct 40593 ACGAAGGCGGAGAACCAGGTGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGACAGGGT 40534
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || || || |||||||| ||||| ||||| || || || ||||| || ||||||||
Sbjct 40533 ACGGCCGTCCTCCAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGAATACC 40474
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| ||||||||| ||| ||| ||||||||||| || | |||||| || |
Sbjct 40473 CTCCTTGTCCTGGATCTTTGACTTGACATTGTCGATGGTGTCGGAAGATTCCACCTCAAG 40414
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTA 225700
||||| ||||||||||||| || ||||
Sbjct 40413 GGTGATAGTCTTGCCCGTCACTGTATTTA 40385
>seq335
Length=221524
Score = 120 bits (132), Expect = 7e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
|| |||| ||||| || | || ||| | ||||| || |||||||| |||||||||||
Sbjct 117051 TTCTGGATGTTGTAGTCAGACAGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATC 117110
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
|| || || ||||| || ||||| || |||||||| || ||||| ||| ||| |||
Sbjct 117111 AGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCG 117170
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAAC 225705
|| ||||| |||| || || || | || |||||||| ||||||| || || | |||
Sbjct 117171 ATAGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTCAGGGTCTTGACGAAA 117230
Query 225706 ACTTGCATTTT 225716
| ||||| ||
Sbjct 117231 ATCTGCATCTT 117241
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192495828406610
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |