Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq1092 149 5e-31
>seq1092
Length=189081
Score = 149 bits (164), Expect = 5e-31
Identities = 546/845 (65%), Gaps = 15/845 (2%)
Strand=Plus/Plus
Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316
|||||||| ||| || ||||| |||||||| || || ||||| | | ||| || ||
Sbjct 136946 TTTTGGTAGTCGCCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGCGAGATGTTC 137005
Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGC 4376
||||| || ||||| || || || | | ||| ||||| || || || |||
Sbjct 137006 TCCATGAAGTCAAAGGGGTTGGTGGAGCGGTAGACCTTTTCGTTGCCGAGGGCGACCAGC 137065
Query 4377 AATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTA-A 4435
| ||||| || ||||| || || ||||| |||| || ||| ||| || || | | |
Sbjct 137066 AGACGGTCGGCAACAAACTCAATGTACTGCTTCATCAGGTCGGCGTTCATGCCGAGCAGA 137125
Query 4436 TCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTAT 4495
| || || || |||| ||||| ||||| | ||| || | || || || ||||| ||
Sbjct 137126 GCGCAG-GGCAGGGCGTCGGTCAAGAACTCCTTTTCAATGGCGACAGCGTCGGTGATGAT 137184
Query 4496 ATCTTTTATTTTATCTT-TAGATGGTTTATTTACTAAGTATCCA-AACAATAAACACGCA 4553
|| | || | ||| | | ||| || | || | | || | | || |||
Sbjct 137185 TTCCTCAATC--AGCTTCTTGCTGGGGCGGTTGTTGAGGTGCGAGAAGAGCAGGCAGGCA 137242
Query 4554 AAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGC 4613
|| || |||| || ||||| | | |||||| ||||| ||||| || | ||||||
Sbjct 137243 AAGTCTGTGTGCAGGCCCTCGTCGCGGGAAATCAGCTCGTTGGAAAAGGTCAGGCCGGGC 137302
Query 4614 ATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCT 4673
|| | ||| | ||| |||||||| || | ||||| | || || ||||| ||||||
Sbjct 137303 ATGAGACCGCGCTTGCGCAGCCAAAAGATGGAAGCAAAGGCGCCCGAGAAGAAGATGCCT 137362
Query 4674 TCTACGGCGGCAAACGCTACTA---ATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATC 4730
|| ||||||||||| || || | | ||| | ||| || | | ||| ||||
Sbjct 137363 TCGACGGCGGCAAAGGCCACCAGACGTTGGGCAAAGGTCGA-CT--CGTGGTCGGCAATC 137419
Query 4731 CATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAAT 4790
|| || | ||||||| || || | ||| ||||| || | || ||||||||
Sbjct 137420 CACTTGAGGGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTATCAATGGCGTTAAAC 137479
Query 4791 AATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCA 4850
| | || | || || | || || ||||| || || || || | ||
Sbjct 137480 AGGTAGCTGCGCTGGGCGGGCTCCTTGATGTACGTGTCAATCAGCAGCGAGTATGTCTCG 137539
Query 4851 GAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGA 4910
|| || || || || || |||||||| ||||| ||||| | || || | | ||
Sbjct 137540 GAGTGGATGTTCTCCATCATGATCTGAAAGCCGTAGAAGCAGCGGGCCTCGGGGATCTGG 137599
Query 4911 ACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAA 4970
|| ||| | || | || || | ||| ||||| || || ||||| || |||||
Sbjct 137600 ACCTCGCCCGAGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGACGCGGCAAAG 137659
Query 4971 AACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAA---GTTTTTTCCAGTGG 5027
|| |||| || || || || ||||||| |||||| || | | || ||||||| |
Sbjct 137660 AAGGCCAGCACGTGCGAGATGAAGTACTTTTCGTCCTTGTTCATGCGGTTGTTCCAGTCG 137719
Query 5028 GGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTG 5087
||| || || | | |||| || || ||||||| || ||||| || || ||||||
Sbjct 137720 TGCAGGTCCTTGGACAGGTCAATCTCCTCGGCAGTCCAGAAGGACGCCTCGGCCTTTTTG 137779
Query 5088 TACAT 5092
|||||
Sbjct 137780 TACAT 137784
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427037551195895
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |