Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq1750 149 9e-31
>seq1750
Length=138661
Score = 149 bits (164), Expect = 9e-31
Identities = 461/708 (65%), Gaps = 14/708 (2%)
Strand=Plus/Minus
Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579
|||||||| || || | ||| ||| ||||| || || || |||||||||| | |
Sbjct 35675 TCAAATTCCTCGCCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGACACATCAGGGTC 35616
Query 76580 CACT-CACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAA 76638
|| | | | ||||| | || || ||||| || | || || ||||| ||||| | ||
Sbjct 35615 CAGTTCTCGTTCTTC-TCGACACGCTTCATGAACATGTCGGGAATCCACAGAGCTAGGAA 35557
Query 76639 TAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCAT 76698
|| || |||| | || || || || |||||| || || |||||||| |
Sbjct 35556 CAGGTCACGGGCGCGGACCTCCTCCTTACCATGATTCTTGCGCAGGTCAAGGAACTCAAA 35497
Query 76699 AATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCC 76758
| ||| | ||||| || || || || || || | | |||| || || || || || ||
Sbjct 35496 CACATCGGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACCAGGGCGCTTGTTGCCGCC 35437
Query 76759 CTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGA 76818
||| || | ||| | ||||||||| || | || | || ||| || ||||||||||| ||
Sbjct 35436 CTGGTCGACATAGCGGGCAGTGTTGTTGAACACGCGCAGCATGGGGATAATGCCGTTGGA 35377
Query 76819 TGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCC 76878
||||| || || |||| ||| || ||| || || ||| || | |||||
Sbjct 35376 GGTACCGTTGGTACCAGCAATGTACGAGCCAGTGGCGCGGATACGGTGAACATTGAGGCC 35317
Query 76879 TATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTC 76938
|| || || ||||| || || || | |||||| || | || || || ||||| ||
Sbjct 35316 GATACCACCAGCCATCTTGGAAATCATAGCACAAGTCTTGAGAGTATCGTAAATGCCTTC 35257
Query 76939 TATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCC 76998
|| || ||| |||||| || ||||| || |||| || ||| ||| ||
Sbjct 35256 AATCGAGTCCTCCTTCATGTCAACCAGAAAGCAAGATGACAGCTGGGCCTGAGGAGTACC 35197
Query 76999 TGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGT 77058
|| || |||| || || || || ||||| || | || || | || ||||| ||
Sbjct 35196 AGCGTTGAACAGAGTGGGCGAGGCGTGAGTAAAGAACTTGCTCGACATGAGGTTGTACGT 35137
Query 77059 TTCAATAAC-----TGCTTCTAT-ATCCCATTGATGAATTCCTACAGCGACACGCATCAA 77112
||||| || | ||| | | |||| |||| || ||||| |||||||| |
Sbjct 35136 CTCAATGACGCGGTCGACTCTGTCACCCCA--GATG----CCAACAGCCACACGCATAAT 35083
Query 77113 CATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAA 77172
||| ||||| || || || ||| |||| | | |||| || ||| || ||||
Sbjct 35082 CATGTGCTGGGGACGCTCGACAATCTTGCCGTCCAACTTCAGCAGGTACGAACGCTCCAG 35023
Query 77173 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220
|| || || ||||| || | ||| |||||| | ||||| | |||
Sbjct 35022 GGTCTTGAAGCCAAAGTACTGGTAGTTAAAGTCACGATCGTACACAAT 34975
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712913769460800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |