Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1750 149 9e-31 >seq1750 Length=138661 Score = 149 bits (164), Expect = 9e-31 Identities = 461/708 (65%), Gaps = 14/708 (2%) Strand=Plus/Minus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 |||||||| || || | ||| ||| ||||| || || || |||||||||| | | Sbjct 35675 TCAAATTCCTCGCCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGACACATCAGGGTC 35616 Query 76580 CACT-CACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAA 76638 || | | | ||||| | || || ||||| || | || || ||||| ||||| | || Sbjct 35615 CAGTTCTCGTTCTTC-TCGACACGCTTCATGAACATGTCGGGAATCCACAGAGCTAGGAA 35557 Query 76639 TAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCAT 76698 || || |||| | || || || || |||||| || || |||||||| | Sbjct 35556 CAGGTCACGGGCGCGGACCTCCTCCTTACCATGATTCTTGCGCAGGTCAAGGAACTCAAA 35497 Query 76699 AATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCC 76758 | ||| | ||||| || || || || || || | | |||| || || || || || || Sbjct 35496 CACATCGGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACCAGGGCGCTTGTTGCCGCC 35437 Query 76759 CTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGA 76818 ||| || | ||| | ||||||||| || | || | || ||| || ||||||||||| || Sbjct 35436 CTGGTCGACATAGCGGGCAGTGTTGTTGAACACGCGCAGCATGGGGATAATGCCGTTGGA 35377 Query 76819 TGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCC 76878 ||||| || || |||| ||| || ||| || || ||| || | ||||| Sbjct 35376 GGTACCGTTGGTACCAGCAATGTACGAGCCAGTGGCGCGGATACGGTGAACATTGAGGCC 35317 Query 76879 TATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTC 76938 || || || ||||| || || || | |||||| || | || || || ||||| || Sbjct 35316 GATACCACCAGCCATCTTGGAAATCATAGCACAAGTCTTGAGAGTATCGTAAATGCCTTC 35257 Query 76939 TATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCC 76998 || || ||| |||||| || ||||| || |||| || ||| ||| || Sbjct 35256 AATCGAGTCCTCCTTCATGTCAACCAGAAAGCAAGATGACAGCTGGGCCTGAGGAGTACC 35197 Query 76999 TGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGT 77058 || || |||| || || || || ||||| || | || || | || ||||| || Sbjct 35196 AGCGTTGAACAGAGTGGGCGAGGCGTGAGTAAAGAACTTGCTCGACATGAGGTTGTACGT 35137 Query 77059 TTCAATAAC-----TGCTTCTAT-ATCCCATTGATGAATTCCTACAGCGACACGCATCAA 77112 ||||| || | ||| | | |||| |||| || ||||| |||||||| | Sbjct 35136 CTCAATGACGCGGTCGACTCTGTCACCCCA--GATG----CCAACAGCCACACGCATAAT 35083 Query 77113 CATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAA 77172 ||| ||||| || || || ||| |||| | | |||| || ||| || |||| Sbjct 35082 CATGTGCTGGGGACGCTCGACAATCTTGCCGTCCAACTTCAGCAGGTACGAACGCTCCAG 35023 Query 77173 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220 || || || ||||| || | ||| |||||| | ||||| | ||| Sbjct 35022 GGTCTTGAAGCCAAAGTACTGGTAGTTAAAGTCACGATCGTACACAAT 34975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712913769460800