Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq2283 178 3e-39 seq335 168 1e-36 seq1473 152 1e-31 seq1092 131 4e-25 seq677 93.3 9e-14 >seq2283 Length=86879 Score = 178 bits (196), Expect = 3e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || ||||| || | || || || |||||||||||||||| Sbjct 41111 ACCACCACGAAGGCGGAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGA 41052 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||||||||| || || || || || || |||| ||| || ||||| || Sbjct 41051 CAGGGTACGGCCATCCTCCAGCTGCTTACCCGCGAAAATCAGACGCTGCTGGTCCGGGGG 40992 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||| |||||||| | || ||| | || || || ||||| | ||||| Sbjct 40991 AATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCCGACGACTCGAC 40932 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||||||||| ||||| || || | |||||| ||||| || ||||| Sbjct 40931 TTCGAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 40884 Score = 161 bits (178), Expect = 2e-34 Identities = 169/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || ||||| || | || || || |||||||||||||||| Sbjct 40883 ACCACCACGAAGGCGGAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGA 40824 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||| ||||| || || || || |||||||||| ||| || ||||| || Sbjct 40823 CAGGGTACGGCCGTCCTCCAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCCGGAGG 40764 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| |||||||| || |||||||| | || ||| | || || || ||||| | ||||| Sbjct 40763 AATGCCCTCCTTATCCTGGATCTTGGACTTGACGTTGTCAATGGTATCCGACGACTCGAC 40704 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATAT 283093 |||||||||||| ||||| || || | ||||| |||| ||| Sbjct 40703 TTCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGACTAT 40662 Score = 159 bits (176), Expect = 7e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || ||||| || | ||| || || |||||||| ||||| | Sbjct 40599 ACCACCACGAAGGCGGAGAACCAGGTGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGA 40540 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||| ||||| || || || || |||||||||| ||| || ||||| || Sbjct 40539 CAGGGTACGGCCGTCCTCCAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCCGGGGG 40480 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||| |||||||||| || || | ||||| ||||| |||| ||| || Sbjct 40479 AATACCCTCCTTGTCCTGGATCTTTGACTTGACATTGTCGATGGTGTCGGAAGATTCCAC 40420 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCA 283077 || || ||||| ||||| ||||||| Sbjct 40419 CTCAAGGGTGATAGTCTTGCCCGTCA 40394 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || |||||||| || || ||||| || | ||| || || |||||||||||||| | Sbjct 41338 CCGCCACGCAGACGCAGAACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 41279 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||||||||| || || || || || || |||| || || ||||| ||| Sbjct 41278 AGGGTACGGCCATCCTCCAGCTGCTTACCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 41219 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || |||||||| || |||||||| | || || | ||||| || || || | ||| || Sbjct 41218 ATGCCCTCCTTATCCTGGATCTTCGACTTCACATTGTCGATGGTATCGGAGGATTCCACC 41159 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||| ||||| || || | |||||| ||||| || ||||| Sbjct 41158 TCAAGAGTGATTGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 41112 >seq335 Length=221524 Score = 168 bits (186), Expect = 1e-36 Identities = 152/191 (80%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||||| || |||||||||||||| || || || || || |||||| Sbjct 117051 TTCTGGATGTTGTAGTCAGACAGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATC 117110 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | ||| || ||||| ||||| ||||||||||| || ||||| | || || | ||| Sbjct 117111 AGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCG 117170 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAAT 283091 ||||||||||| | || || ||||| || |||||||||||||||| ||||| ||||| Sbjct 117171 ATAGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTCAGGGTCTTGACGAAA 117230 Query 283092 ATCTGCATTTT 283102 |||||||| || Sbjct 117231 ATCTGCATCTT 117241 >seq1473 Length=183801 Score = 152 bits (168), Expect = 1e-31 Identities = 141/179 (79%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || || ||||||||||| | || |||||||||||||| || || || || ||||||||| Sbjct 105036 TTCTGAATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATC 105095 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | ||| || ||||| ||||| ||||||||||| |||||||| | || ||| | ||| Sbjct 105096 AGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCG 105155 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || |||||||| | ||||| || || || || ||||||||||||| ||||| ||||| Sbjct 105156 ATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 105214 >seq1092 Length=189081 Score = 131 bits (144), Expect = 4e-25 Identities = 179/250 (72%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 230161 AAATCGTCACAGAAGTAGTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTTGCC 230220 ||||| |||| || | || || | ||||||||||||| | |||||| | || ||| Sbjct 137186 AAATCATCACCGACGCTGTCGCCATTGAAAAGGAGTTCTTGACCGACGCCCTGCCCTGCG 137127 Query 230221 GTCTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTA 230280 ||| |||||||||| || || || ||| ||| || || || || || || || ||| Sbjct 137126 CTCTGCTCGGCATGAACGCCGACCTGATGAAGCAGTACATTGAGTTTGTTGCCGACCGTC 137067 Query 230281 TTTTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGG 230340 | | || || || || |||| || || || ||||| |||||||| | || |||| Sbjct 137066 TGCTGGTCGCCCTCGGCAACGAAAAGGTCTACCGCTCCACCAACCCCTTTGACTTCATGG 137007 Query 230341 AGCTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAA 230400 || ||| || ||| || || || ||||||||||| ||||||||| |||| || |||| Sbjct 137006 AGAACATCTCGCTCGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGCGACTACCAAA 136947 Query 230401 GGCCCGGTGT 230410 | ||||||| Sbjct 136946 AGGCCGGTGT 136937 >seq677 Length=56570 Score = 93.3 bits (102), Expect = 9e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 316983 GTCGAGGTCATGCTCAACATATGCAGTTTTCAGAATATCCTTCGTCGGGAACCCTTCCAA 317042 ||| ||||| ||||| ||| | |||| || | || | | ||||| || || | Sbjct 3152 GTCCAGGTCGTGCTCGACAAAGACAGTCTTGACCTCGGACTGCTTGGGGAAACCCTCAAC 3093 Query 317043 CTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAG 317102 ||| |||| || || | |||||| ||||||||||| | ||| ||||| ||||| || Sbjct 3092 CTGCTCGTTGTTGATGGCGCGCATCAGCGTCGACTTGCCCGAACCGTTGGGACCGCACAG 3033 Query 317103 ACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACC 317162 ||| || || | || ||||||| | | |||| | ||| || |||||||| |||| Sbjct 3032 ACCGTAGCGCTGGCCACGCTTCAGACGCAGATGGGTCTGGTTAAGCAGAATCTTGGCACC 2973 Query 317163 ATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201 || || |||||||| || | ||||||||||| || Sbjct 2972 GTAGGCAAGAGAGAAGGTGCAGTTGCACAGGTCCTCACC 2934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046708152734010