Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq2283 136 1e-26
seq335 136 1e-26
seq1473 114 3e-20
>seq2283
Length=86879
Score = 136 bits (150), Expect = 1e-26
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || ||||| || || || || ||||| || ||||||||| ||| ||
Sbjct 41115 CAAATCTTCGTCAAGACTCTTACCGGCAAGACAATCACTCTTGAGGTGGAATCCTCCGAT 41174
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || || ||||| ||||| || || || || ||||||||||||||
Sbjct 41175 ACCATCGACAATGTGAAGTCGAAGATCCAGGATAAGGAGGGCATTCCTCCGGACCAGCAG 41234
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || ||||| || || ||||| || ||||| | || || |||| || ||| ||
Sbjct 41235 CGCCTGATTTTCGCGGGTAAGCAGCTGGAGGATGGCCGTACCCTGTCCGACTACAACATC 41294
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133
|| || || || || || || || ||| ||
Sbjct 41295 CAGAAGGAGTCCACCCTCCACCTGGTTCTG 41324
Score = 132 bits (146), Expect = 1e-25
Identities = 141/186 (76%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004
|| || || || |||||||| ||||||||| || ||||||||||| || ||||| |
Sbjct 40396 ACGGGCAAGACTATCACCCTTGAGGTGGAATCTTCCGACACCATCGACAATGTCAAGTCA 40455
Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064
||||| |||||||| || || || || ||||||||||| || || ||||| || |||||
Sbjct 40456 AAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAGCAGCGTCTGATCTTTGCTGGAAAG 40515
Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124
||||| || || || | || || |||| |||||| |||| || || || || || ||
Sbjct 40516 CAGCTGGAGGACGGCCGTACCCTGTCCGACTATAACATCCAGAAGGAGTCCACTCTCCAC 40575
Query 178125 CTTGTT 178130
|| |||
Sbjct 40576 CTGGTT 40581
Score = 122 bits (134), Expect = 2e-22
Identities = 151/207 (73%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || ||||| || || || || ||||| ||||| || || || ||
Sbjct 40887 CAAATCTTCGTCAAGACTCTTACCGGCAAGACCATCACTCTCGAAGTCGAGTCGTCGGAT 40946
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || |||||||| ||||| |||||||| || || || || |||||||||||
Sbjct 40947 ACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAGCAG 41006
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || ||||| || || ||||| || ||||| | || || | || || ||| ||
Sbjct 41007 CGTCTGATTTTCGCGGGTAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATC 41066
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| || || || || || || || |||
Sbjct 41067 CAGAAGGAGTCTACTCTTCACCTGGTT 41093
Score = 113 bits (124), Expect = 1e-19
Identities = 145/200 (73%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990
|||| || || ||||| || || || ||||| ||||| || || || || ||||| |
Sbjct 40666 TCGTCAAGACCCTCACCGGCAAGACCATCACTCTCGAAGTCGAGTCGTCGGATACCATTG 40725
Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050
| |||||||| ||||| ||||| || || || || |||||||||||||| || || |
Sbjct 40726 ACAACGTCAAGTCCAAGATCCAGGATAAGGAGGGCATTCCTCCGGACCAGCAGCGTCTGA 40785
Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110
|||| || ||||| ||||| || || || | || || | || || ||| |||| || |
Sbjct 40786 TCTTTGCTGGAAAGCAGCTGGAGGACGGCCGTACCCTGTCTGACTACAACATCCAGAAGG 40845
Query 178111 AATCAACACTGCATCTTGTT 178130
| || || || || || |||
Sbjct 40846 AGTCTACTCTTCACCTGGTT 40865
>seq335
Length=221524
Score = 136 bits (150), Expect = 1e-26
Identities = 141/185 (76%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || || || || || || ||||| ||||||||||| || ||| |||
Sbjct 117235 CAGATTTTCGTCAAGACCCTGACGGGTAAGACGATTACCCTCGAGGTTGAGTCCTCGGAC 117176
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || ||||| |||||||||||||| || || || || |||||||||||
Sbjct 117175 ACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAG 117116
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| || || ||||| || ||||| | ||||| | || || ||| ||
Sbjct 117115 CGTCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCTGACTACAACATC 117056
Query 178104 CAAAA 178108
|| ||
Sbjct 117055 CAGAA 117051
>seq1473
Length=183801
Score = 114 bits (126), Expect = 3e-20
Identities = 141/193 (73%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 177916 AAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAA 177975
|| ||| || | |||||| || || || || || || || || ||||| ||||| ||
Sbjct 105228 AACTGCCACACAGTTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTGGAGGTCGAGT 105169
Query 177976 GCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGG 178035
||| ||||| ||||| |||||||| ||||| |||||||| || || || || ||||
Sbjct 105168 CCTCGGACACGATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGG 105109
Query 178036 ACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATT 178095
||||||| || || ||||| || || || ||||| || ||||| | || || |||| |
Sbjct 105108 ACCAGCAGCGTCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGTCCGACT 105049
Query 178096 ATAACGTCCAAAA 178108
| ||| | || ||
Sbjct 105048 ACAACATTCAGAA 105036
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203695496204110
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |