Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tolypocladium_20sp._20Salcha_20MEA- 2_20[genbank_20GCA_5F000750145.2_202015-03-02] 44 sequences; 30,832,988 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq26 140 4e-28 seq19 109 6e-19 >seq26 Length=329099 Score = 140 bits (154), Expect = 4e-28 Identities = 162/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 |||| ||||| ||||| || |||||| || || ||||| || || ||||| || Sbjct 245026 CGCAGCACCAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTCCGGCCG 245085 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || || |||||||| || || || |||||||||||||| || | || | | ||||||| Sbjct 245086 TCCTCAAGCTGCTTGCCGGCAAAGATGAGTCGCTGCTGATCCGGGGGGATACCCTCCTTG 245145 Query 43089 TCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| ||| ||| |||| ||| | | | || |||||||||||||| |||| |||||| Sbjct 245146 TCCTGGATCTTTGACTTGA-CGTTGTCGATGGTATCGCTCGATTCCACCTCGAGCGTGAT 245204 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || |||||||| || ||||| || ||||| ||||| Sbjct 245205 CGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCAT 245240 Score = 131 bits (144), Expect = 2e-25 Identities = 155/205 (76%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 42981 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 43040 |||| ||||||||||| || || ||||| || || || || |||| || |||||| Sbjct 244810 TGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTACGGCCGTCCTCCAGCTGC 244869 Query 43041 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTT 43100 |||||||| || || || |||||||| || | || | || |||||||||| ||| | || Sbjct 244870 TTACCAGCAAAGATAAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCC-TGAATCTT 244928 Query 43101 TG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCG 43158 | |||| ||| | | | ||||||||||||||||| || | |||||| || ||||| | Sbjct 244929 GGACTTGA-CGTTGTCGATGGTGTCGCTCGATTCCACCTCCAGCGTGATCGTCTTGCCAG 244987 Query 43159 TTAGCGTCTTTACAAAGATTTGCAT 43183 | | ||||| || ||||||||||| Sbjct 244988 TCAAAGTCTTGACGAAGATTTGCAT 245012 Score = 86.0 bits (94), Expect = 7e-12 Identities = 122/169 (72%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || |||||||| || | || || || | || || |||||||| || ||||| Sbjct 245570 CTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAA 245629 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || || ||||||||||||| || | || |||||||||| ||| | || | || | Sbjct 245630 GATCAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-TGAATCTTGGACTTCACAT 245688 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159 | | | |||||| ||| || || || | |||||||| |||||||| Sbjct 245689 TGTCGATGGTGTCGGACGACTCGACCTCAAGAGTGATGGTCTTGCCCGT 245737 >seq19 Length=692283 Score = 109 bits (120), Expect = 6e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 |||| ||||| |||| ||||||||||| || || ||||| || ||| || || | Sbjct 74181 CGCAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA 74240 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || || |||||||| || ||||| || || ||||||||||| | || | || ||||||| Sbjct 74241 TCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTG 74300 Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148 ||| ||| || |||| | | | |||||| || ||||| || | ||||| Sbjct 74301 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATC 74360 Query 43149 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 || || ||||| || ||||| || || || ||||| || Sbjct 74361 GTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 74398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571817285500320