Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tolypocladium_20sp._20Salcha_20MEA- 2_20[genbank_20GCA_5F000750145.2_202015-03-02] 44 sequences; 30,832,988 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq1 116 8e-21 seq3 91.5 3e-13 >seq1 Length=2615055 Score = 116 bits (128), Expect = 8e-21 Identities = 265/390 (68%), Gaps = 24/390 (6%) Strand=Plus/Minus Query 254011 TGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAA 254070 |||| ||| | || ||||| || ||||| |||||||| ||||||||||| || || | Sbjct 791821 TGCTCTTCTATGGCCCTCCAGGTACAGGAAAGACGTCCACCATCCTGGCTCTCGCGAAAG 791762 Query 254071 CCCTGTTGGGCGAGGGGAACATGAGAGAG---CGCGTGCTCGAGCTGAACGCTTCTGACG 254127 || | || | |||| |||| || || ||||||||||| || || || |||| Sbjct 791761 AGCTCTATGG--ACCGGAA-ATGATCAAGTCCCGGGTGCTCGAGCTCAATGCGTCCGACG 791705 Query 254128 AACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGA-CTTT-CTC-CAAGA---TGTCGA 254181 | || || | | ||||||| || ||| |||||| |||| | | || | || | | Sbjct 791704 AGCGTGGCATCTCCATCGTCCGAGAAAAGGTCAAGAACTTTGCGCGCATGCAATTGACCA 791645 Query 254182 TTTCGTCGT-----TCCAAC--CCGG-----CTGTCCGCCTTTCAAGCTCGTGATCCTGG 254229 ||||| ||||| | | ||| ||||| |||||| || | ||||| | Sbjct 791644 ACCCGTCGCAATCCTCCAAGAACAAGTATCCCTGCCCGCCATTCAAGATCATCATCCTCG 791585 Query 254230 ACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGATGGAGACGC 254289 |||| || ||| |||||||| || || ||| || || ||||| || ||||| || Sbjct 791584 ACGAAGCCGACTCCATGACGCAAGATGCTCAGAGTGCTCTGCGCCGCACAATGGAAACAT 791525 Query 254290 ACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCATCGCCCCGC 254349 || | | ||||| || ||| || | |||||||||||| | ||||||| ||||| Sbjct 791524 ACAGCAAGATCACGCGCTTCTGCTTGATCTGCAACTACGTGACTCGCATCATCGACCCGC 791465 Query 254350 TGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 | ||| |||||| ||||||||| |||| Sbjct 791464 TTGCTAGTCGGTGTAGCAAGTTTCGCTTCA 791435 >seq3 Length=2036465 Score = 91.5 bits (100), Expect = 3e-13 Identities = 121/168 (72%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 254000 CCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGC 254059 |||||| ||| |||| || |||| || || || || ||||||||||| || | || || Sbjct 734664 CCTTCCCCATCTGCTCCTCTACGGGCCGCCGGGTACGGGCAAGACGTCCACGGTTCTCGC 734723 Query 254060 GCTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGC 254119 ||||||||| | | | |||| |||||| | || ||||| ||||| ||||| Sbjct 734724 GCTGGCCCGCCGCATCTACGGCGCCTCCAACATGCGGCAGATGGTGCTGGAGCTCAACGC 734783 Query 254120 TTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTT 254167 || ||||| || || | ||||| || ||||| |||||||||| || Sbjct 734784 ATCCGACGACCGAGGCATCGACGTGGTGCGCGAGCAGATCAAGACGTT 734831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073765794664192