Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tolypocladium_20sp._20Salcha_20MEA- 2_20[genbank_20GCA_5F000750145.2_202015-03-02] 44 sequences; 30,832,988 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq11 113 4e-20 >seq11 Length=970842 Score = 113 bits (124), Expect = 4e-20 Identities = 251/366 (69%), Gaps = 12/366 (3%) Strand=Plus/Plus Query 21111 ACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGG 21170 ||||||||||| || | ||| ||||| || || ||||| | || |||||| ||| Sbjct 259193 ACGTAAAACTGGGCAAACATGTGGCAAGGCGGCAGGGCCATGCTCGTCAGGTCCTTCGGG 259252 Query 21171 TTCCACGCGCACATAACGATGCGCCGATCGTGGGGC--CGCCTGTTAATTAGATCCACCA 21228 |||||||| |||| | || || || |||| |||| || | | || | | || Sbjct 259253 TTCCACGCAGACATGATTATACGGCGGTCGTAGGGCTTCGTCCGCAGCTTGTGT--ATCA 259310 Query 21229 CGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGT-TGGCGTCGGCCCCCCTGTACTCC 21287 ||| |||||||| || ||||| ||| ||||| || | ||| || | |||| | Sbjct 259311 CGTCGGCGAGCTGGTCGACGCCCTGGCCCGTGTAGTCTGTCTTCGCATCCAC-GTACGCG 259369 Query 21288 GCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTCC 21347 || ||||| || | ||||||||||||||| || ||||||| |||||| | |||| Sbjct 259370 GCGCCAAAGTGCCGCCACTGGAACCCGTAGACGGGCCCCAAATCGCCAACTTCTCGGT-- 259427 Query 21348 CCGA-AGCCCTGCGCCG-CCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTACGC 21405 ||| || || ||||| | | || |||| ||||||| |||||||||| || |||| Sbjct 259428 GCGACAGGCCGACGCCGTCGAGGAACTCGCGCGACCCGTTGCCGTCCCAAATCTTGACGC 259487 Query 21406 C-GCGGCGCGACAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACTCCTCC 21464 | || ||| ||| || ||| ||| | || ||| |||||||||| ||| | Sbjct 259488 CGGCCTCGC-TCAGCGCGAGTGAGGACGTGTTGGCCTCGATGAACCACAGCAGCTCGGCG 259546 Query 21465 ACGACG 21470 |||||| Sbjct 259547 ACGACG 259552 Score = 111 bits (122), Expect = 1e-19 Identities = 134/180 (74%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 20930 ATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGT 20989 ||||||||||| | || ||||||||||| |||| | |||| | | || ||||| Sbjct 258931 ATCAACGTGGTCGAGATAGACGTGGGCGTCTCCCATGACGTGCGTCAGG-CTGCCGGGCA 258989 Query 20990 CAGGCCCGTG-ACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048 | || || || || || | || | |||||| | ||||||||||| ||||| |||| Sbjct 258990 CCAGCTCGCACACATGGGCAAGCATGTGCGTCAGCAACGCGTAGCTGGCAATGTTGAACG 259049 Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAG 21108 |||| ||||||||||||||| |||||||||||| ||||| ||| ||| | ||| ||| Sbjct 259050 GGACGCCGAGGCCCATGTCGCAGGACCTCTGGTATAGCTGACAGTGCAGGTGGCCCTGAG 259109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427775770605120