Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tolypocladium_20sp._20Salcha_20MEA- 2_20[genbank_20GCA_5F000750145.2_202015-03-02] 44 sequences; 30,832,988 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq3 223 5e-53 seq42 156 6e-33 >seq3 Length=2036465 Score = 223 bits (246), Expect = 5e-53 Identities = 364/519 (70%), Gaps = 4/519 (1%) Strand=Plus/Minus Query 96865 GATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTT 96924 ||||||| ||||||||||| || || || |||||| | ||| ||||| |||| || | Sbjct 915388 GATACGTCGACCAGGGCGGCAACAAGCGACCCGGCGCTTTCGCCATCTACCTGGAGCCGT 915329 Query 96925 GGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCAC 96984 ||||||| ||||| || || || |||| |||| || ||| ||| || ||||| | Sbjct 915328 GGCACGCCGACGTCTTCGAGTTCCTCGATCTGCGGAAGAACCACGGCAAGGAGGAGGCTC 915269 Query 96985 GAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACG 97044 | || | ||| |||| ||| || ||| | || ||| | ||||||||||| ||| | Sbjct 915268 GTGCTCGTGACCTGTTCCTTGCCCTGTGGATCCCCGATCTCTTCATGAAGCGTGTCGAGA 915209 Query 97045 ACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGG 97104 | |||| |||||| ||| ||||||||| || | ||||| ||| | ||||||| | Sbjct 915208 AGAATGGCGACTGGACCCTCATGTGCCCCAACGAATGCCCCGGCCTGGCTGATTGCTATG 915149 Query 97105 GCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGA-TACGTGAGACGA 97163 |||| ||||| ||||| |||| || |||||| ||||| | ||| |||| | Sbjct 915148 GCGATGAGTTCGAGGCTCTGTACGAAAAGTATGAGCAACAGGGCAAAGGTCGTAAGACCA 915089 Query 97164 GTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCC 97222 || || | |||| |||||| | ||||| || || ||| |||||||| | || Sbjct 915088 -TCCGGGCGC-AGAAGCTGTGGTACTCCATCTTGGAAGCCCAGACGGAGACTGGCAACCC 915031 Query 97223 GTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCAT 97282 | ||| |||||||||||| || || || || |||||||| || |||||||||| Sbjct 915030 CTTCATGCTCTACAAGGATGCCTGCAACCGAAAGAGCAACCAGAAGAACCTGGGCACCAT 914971 Query 97283 CAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGT 97342 | ||||||| |||||||| || || | || ||| | |||| |||||| ||| || Sbjct 914970 CCGCAGCTCCAACCTGTGCACTGAGATCATCGAATACTCTGCTCCCGACGAGGTGGCCGT 914911 Query 97343 TTGCGTTCTGGCATCGGTCAATCTGCCCAAGTTTGTAGA 97381 ||| ||||||||| | ||||||| ||||| || Sbjct 914910 GTGCAACCTGGCATCGTTGGCTCTGCCCGCCTTTGTTGA 914872 >seq42 Length=1784988 Score = 156 bits (172), Expect = 6e-33 Identities = 209/288 (73%), Gaps = 2/288 (1%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| | |||||||| ||||| | |||||| |||| || Sbjct 876801 ATCTGGCAAATGTACAAGAAGGCCGAAGCCTCCTTCTGGACCGCTGAAGAGATCGACCTC 876860 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 ||||| ||| || |||| ||| | | || ||| ||| |||| | | ||| | || Sbjct 876861 TCCAAAGACTTGCACGACTGGAACAACCGCCTGAATGATGATGAGAGGTACTTTGTCTCT 876920 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||||| |||||||||| |||| |||||| || ||||||||||| ||||| || || || Sbjct 876921 CACATCCTGGCCTTCTTCGCCGCCTCCGACGGCATCGTCAACGAAAATCTCGTCGA-GCG 876979 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGAT 125257 ||| ||| | || || |||| ||||| ||||||||||| |||||||| Sbjct 876980 CTTCAGCGGCGAGGTCCAGATCCCCGAGGCCCGATGCTTCTACGGATTCCAGATCATGAT 877039 Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305 ||||| | ||||| || | ||||||| ||||||||| ||||| Sbjct 877040 GGAGAATATTCACTCTGAGACGTACTCTCTCTTGATTGACACCTACAT 877087 Score = 143 bits (158), Expect = 4e-29 Identities = 335/501 (67%), Gaps = 21/501 (4%) Strand=Plus/Plus Query 125361 ATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCC 125420 || || || ||||| | |||| ||||| |||||| | ||| | | || || | || Sbjct 877198 ATTCGCAAGAAGGCCGATTGGGCCATTCGATGGATCCAGGACAAGGACTCGTCCTTTGCT 877257 Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480 | | ||||| || ||||||||||| |||||||||||||| ||| ||||| || Sbjct 877258 CAGCGCCTGGTTGCCTTCGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCCTTTGCTTCC 877317 Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATA 125540 ||||| |||||||||||||| || |||||||| || |||| | |||||| | || Sbjct 877318 ATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCTTGACCTTCTCGAACGAGCTCATC 877377 Query 125541 TCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGT 125600 || ||||||||||| || ||| ||||||||| || ||| | | | | || Sbjct 877378 TCGCGAGACGAGGGTCTGCACACCGACTTTGCCTGCCTCCTG---CACTCCCACATG--- 877431 Query 125601 CCCGAGTGCAGATCCAGCGATGAAAAGGTCATC---AACATTGTAACCGATGCCGTGAGG 125657 || | | ||||| ||||||||||| |||| | || ||||| || | Sbjct 877432 ---AAGCACCGTGCCAGC---AAAAAGGTCATCGAGGACATCATCACGGATGCTGTCACC 877485 Query 125658 ATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAG 125717 || || || |||||| | || || |||| ||| | || | ||||||||| ||| Sbjct 877486 ATCGAGCAGGAGTTTTTGACTGAGGCCCTGCCGTGCGCGCTGCTCGGCATGAACGCCAAT 877545 Query 125718 CTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--C 125775 | ||| ||||||| ||||| || || || || || || || | | ||| | Sbjct 877546 TTGATGAAGCAGTACATCGAGTTCGTCGCCGACCGCCTGCT---CGTGGCCCTCGGCAAC 877602 Query 125776 G-CAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGT 125834 | ||| | ||||| | ||| ||||| || |||||| | ||| || || | || Sbjct 877603 GAGAAGGTGTACAAGTCGTCGAACCCCTTCGACTTCATGGAAAACATCTCGCTGGGTGGC 877662 Query 125835 AAGACCAACTTTTTCGAGAAG 125855 ||||||||||| || |||||| Sbjct 877663 AAGACCAACTTCTTTGAGAAG 877683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058792417440