Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tolypocladium_20sp._20Salcha_20MEA- 2_20[genbank_20GCA_5F000750145.2_202015-03-02] 44 sequences; 30,832,988 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq5 91.5 1e-13 seq11 84.2 1e-11 >seq5 Length=1590114 Score = 91.5 bits (100), Expect = 1e-13 Identities = 131/180 (73%), Gaps = 6/180 (3%) Strand=Plus/Minus Query 44368 CGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGACAAGTTTGCGTCGT- 44426 |||||||||| || || | ||| ||| | ||| |||| || |||||||||||||| Sbjct 14019 CGTCAAGGTGCGGGTGCGAACCACCAAGATCCCCCAGATCGGAGACAAGTTTGCGTCTCG 13960 Query 44427 TCACGGCGCAAAAGGGGACATGCGGAGC--CGTCCTGACCCAGGAGGACATGCCCTTCGA 44484 |||||| |||||||| || ||| | ||| | ||| | ||||||||||| || Sbjct 13959 TCACGGT-CAAAAGGGCACCATCGGCGTGACGTACCGAC--AAGAGGACATGCCGTTTAC 13903 Query 44485 CAAAAACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGATGAC 44544 | | || ||| ||||||| ||||||||||||||||||| |||| || | ||||| Sbjct 13902 GAGGGAGGGCGTGACGCCCGACATCATCATCAACCCCCACGCTATTCCGTCGCGAATGAC 13843 >seq11 Length=970842 Score = 84.2 bits (92), Expect = 1e-11 Identities = 151/217 (70%), Gaps = 3/217 (1%) Strand=Plus/Plus Query 25377 ATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACG 25436 |||| ||| ||||||| | ||||| | ||| || || ||| |||| || ||| Sbjct 258878 ATCCCCAGCTCGGGAAAGTCCCGTGGCTCGCGCTCCAGTTGCTCCTTGAGCGCATCAACG 258937 Query 25437 TGATCCAGGTAGACGTGAGCGTCTCCCAGAGTGTG-GACAAACTCTCCCGGTTCTAGCCC 25495 || || || |||||||| |||||||||| ||| | || || || || | ||| | Sbjct 258938 TGGTCGAGATAGACGTGGGCGTCTCCCATGACGTGCGTCAGGCTG-CCGGGCACCAGCTC 258996 Query 25496 GGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCC 25555 | || | || | ||||| ||| || | ||||||||| ||||| || || || || Sbjct 258997 GCACACATGGGCAAGCATGTGCGTCAGCAACGCGTAGCTGGCAATGTTGAACGGGACGCC 259056 Query 25556 GAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACA 25592 || |||||||| | ||||||||||| |||||||| Sbjct 259057 GAGGCCCATGTCGCAG-GACCTCTGGTATAGCTGACA 259092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340137417601212