Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tolypocladium_20sp._20Salcha_20MEA- 2_20[genbank_20GCA_5F000750145.2_202015-03-02] 44 sequences; 30,832,988 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq42 107 3e-19 >seq42 Length=1784988 Score = 107 bits (118), Expect = 3e-19 Identities = 86/101 (85%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || |||| ||| |||||| || |||||||| || ||||||||||| ||||| Sbjct 681622 GCCAAGCGCCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCTAT 681680 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| ||||||||||| || ||||||||| |||||| Sbjct 681681 CCGACGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATCTCTG 681721 Score = 98.7 bits (108), Expect = 2e-16 Identities = 84/101 (83%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||||| | ||||| |||||||| || ||||||||||| || || Sbjct 1150840 GCCAAGCGTCACCGCAAGATCT-TGCGAGACAACATCCAGGGCATCACCAAGCCCGCCAT 1150782 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||||||||| || || ||||| || ||||||||| | |||| Sbjct 1150781 CCGTCGTCTCGCACGCCGTGGCGGTGTCAAGCGTATTTCTG 1150741 Score = 89.7 bits (98), Expect = 8e-14 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| || |||| || | ||| |||||| ||||||| || || |||| ||| | Sbjct 1150675 TGATCTACGAGGAGACCCGCGGTGTCCTGAAGACCTTCCTCGAGGGTGTCATCCGTGACG 1150616 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 | || ||| ||||||||||| || || ||||| ||||| ||| | || ||||||| | Sbjct 1150615 CCGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACGTCCCTCGACGTCGTCTACG 1150556 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | |||| || || ||||| | | || ||||| || ||||| Sbjct 1150555 CCCTGAAGCGCCAGGGCCGCACCCTCTACGGTTTCGGTGGTTAA 1150512 Score = 84.2 bits (92), Expect = 3e-12 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 16529 TCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATC 16588 |||| | || | || || |||| |||| |||| | |||| ||||||| || || ||| Sbjct 681797 TCTGCAGTGATATACGAGGAGACCCGTGGTGTTCTCAAGACCTTCCTCGAGGGTGTCATC 681856 Query 16589 CATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATC 16648 | ||| || || || ||||||||||| || || ||||| || || || |||| | Sbjct 681857 CGTGACGCCGTCACATACACCGAGCACGCCAAGCGGAAGACGGTGACGTCGCTGGACGTT 681916 Query 16649 GTCTATGCATTGAAACGTCAAGGCCG 16674 |||||||| |||| || |||||||| Sbjct 681917 GTCTATGCCCTGAAGCGACAAGGCCG 681942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075159770492