Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tolypocladium_20sp._20Salcha_20MEA- 2_20[genbank_20GCA_5F000750145.2_202015-03-02] 44 sequences; 30,832,988 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq3 129 7e-25 seq42 82.4 1e-10 >seq3 Length=2036465 Score = 129 bits (142), Expect = 7e-25 Identities = 558/873 (64%), Gaps = 17/873 (2%) Strand=Plus/Plus Query 62748 CAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAG 62807 |||| |||||||| || || ||||| ||||| | | | | | |||| || ||||||| Sbjct 914892 CAAC-GATGCCAGGTTGCACACGGCCACCTCGTCGGGAGCAGAGTATTCGATGATCTCAG 914950 Query 62808 TGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACG 62867 |||| || || | |||||| || | || | || || |||||| ||| || | Sbjct 914951 TGCACAGGTTGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTTCGGTTGCAGG 915010 Query 62868 CATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCC 62927 ||||||| || || ||||| || | ||||| || |||| | ||| | || | | || Sbjct 915011 CATCCTTGTAGAGCATGAAGGGGTTGCCAGTCTCCGTCTGGGCTTCCAAGATGGAGTACC 915070 Query 62928 AGACGACTC-GAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTA--T 62984 | | | || | ||| || | || | || | || || | ||| | | | Sbjct 915071 ACA-GCTTCTGCGCCCGGATGGTC--TTACGACCTTTGCCCTGTTGCTCATACTTTTCGT 915127 Query 62985 ACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACA 63044 ||| |||||||| || || | || |||| || || ||||| | || |||| Sbjct 915128 ACAGAGCCTCGAACTCATCGCCATAGCAATCAGCCAGGCCGGGGCATTCGTTGGGGCACA 915187 Query 63045 TCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 63104 | | | ||| || || | | || || || ||||| |||||||| || ||||| || | Sbjct 915188 TGAGGGTCCAGTCGCCATTCTTCTCGACACGCTTCATGAAGAGATCGGGGATCCACAGGG 915247 Query 63105 CTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGA 63164 | | || || || | | | | ||||| || || ||||| |||||||||| Sbjct 915248 CAAGGAACAGGTCACGAGCACGAGCCTCCTCCTTGCCGTGGTTCTTCCGCAGATCGAGGA 915307 Query 63165 ACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGT 63224 || | | | || | |||||||| |||| ||| ||||| | | | || || || |||| Sbjct 915308 ACTCGAAGACGTCGGCGTGCCACGGCTCCAGGTAGATGGCGAAAGCGCCGGGTCGCTTGT 915367 Query 63225 TTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 63284 | || ||||| || | |||||| || ||||| || | || | | ||| || | | | Sbjct 915368 TGCCGCCCTGGTCGACGTATCTGGCCGTGTTGTTGAACACCCGAAGCATGGGGGTGACGC 915427 Query 63285 CATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTG 63344 | ||||| || || ||||| || | || ||| |||| |||| || ||| || Sbjct 915428 CGTTGGAAGTGCCGTTGGTGCCAGCAATGTAGGATCCAGTGGCGCGGATACGGTGAACGT 915487 Query 63345 ATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 63404 || || || || || ||||| || ||||| | || || || | || || |||| Sbjct 915488 TCAGGCCGATGCCACCAGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGA 915547 Query 63405 TGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 63464 | ||||| || || || ||| |||| | | || || || |||| ||| | Sbjct 915548 TACCCTCAATGCTGTCCTCCTTCATATCGACAAGGAAGCAAGAGGACAGCTGGGCCTGGG 915607 Query 63465 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGAT 63524 || |||||||| || | || || || ||||| || || | || || | || | Sbjct 915608 GGGTGCCCGCATTGAACAGCGTGGGCGAGGCGTGGGTGAAGAACTTGCTGGACATGAGGT 915667 Query 63525 TGTACGTCTCAAT----AGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACG 63579 |||||||||| || ||| | | | | || || |||| || || |||||||| Sbjct 915668 TGTACGTCTCGATGACGCGCTCAATGT-TGTCTCCCCAGATG----CCGACGGCGACACG 915722 Query 63580 CATTAACATGTGCTGAGGTCTTTCAACGATCTT 63612 ||| | |||||| || || | ||||| ||||| Sbjct 915723 CATGATCATGTGTTGTGGGCGCTCAACAATCTT 915755 >seq42 Length=1784988 Score = 82.4 bits (90), Expect = 1e-10 Identities = 147/210 (70%), Gaps = 5/210 (2%) Strand=Plus/Minus Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 || || || ||| ||| ||||||||||||| || | ||||| || || || | Sbjct 877412 CAGGCAAAGTCGGTGTGCAGACCCTCGTCTCGCGAGATGAGCTCGTTCGAGAAGGTCAAG 877353 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 || ||||| ||||||||||| || ||||| || ||||| ||||| | || ||||| Sbjct 877352 CCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAGAAG 877293 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA--AC-CGGCGCTGTCATGT 32837 || || || || || || ||||||| || | || || | || | | |||| || Sbjct 877292 ATGCCCTCGACGGCGGCGAAGGCAACCAGGCGCTGAGCAAAGGACGAGTCCTTGTCCTGG 877233 Query 32838 ATCCA-CTTTTGAGCCCAATCGGCCTTCTT 32866 ||||| | || ||||||||||||||||| Sbjct 877232 ATCCATCGAATG-GCCCAATCGGCCTTCTT 877204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631651502400