Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tolypocladium_20sp._20Salcha_20MEA- 2_20[genbank_20GCA_5F000750145.2_202015-03-02] 44 sequences; 30,832,988 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq5 141 2e-28 seq42 113 9e-20 seq4 84.2 4e-11 >seq5 Length=1590114 Score = 141 bits (156), Expect = 2e-28 Identities = 442/675 (65%), Gaps = 17/675 (3%) Strand=Plus/Minus Query 279696 GTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTG 279755 || || |||||||| |||||||||||||||||||| ||||| |||||||||| | | Sbjct 243140 GTCGGCTCTCTGTCTGGTGGTTGGAAGATGAAGCTTGCCCTGGCTCGCGCCATGTTGCAA 243081 Query 279756 CGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCC 279815 |||||||| || || || || || || |||||||| | ||| ||||||| | || Sbjct 243080 AAGGCCGATGTTCTCCTTCTGGACGAACCGACCAACCATCTCGACGTCACCAACATTGCT 243021 Query 279816 TGGCTAGTGTCCTACCTAACCAGTCTGAAGA---ATGTTTCTTCCCTCATTGTCTCTCAC 279872 ||||| | | |||||| | |||| | | | | || || ||||| ||||| ||| Sbjct 243020 TGGCTGGAGAACTACCT--CAAGTC-GCACACCGAGATTACTAGTCTCATCGTCTCCCAC 242964 Query 279873 GACTCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAAG 279932 |||||||||||||| || ||| | | ||| ||||| |||| || |||| Sbjct 242963 GACTCTGGCTTCCTGGACAACGTTACGACCGACATTTACCACTACGAGCCCAACAAGAAG 242904 Query 279933 CTCTCCAAGCACATCGGCAACCTGTCTGCTTTCGTGGCAAAGCGCCCTGAGGCGGCCGCC 279992 || | ||| ||||||||| | || ||||| | | || || ||||| | Sbjct 242903 CTGGCGTGCTACAAGGGCAACCTGGCCGCCTTCGTCGAGATCCGACCCGAGGCCAAGAGC 242844 Query 279993 TACTATGACCTGAAGGACGCCACCGCCAAGTGGGAATTCCCTGAGCCAGGGTTTCTGGAG 280052 ||||| ||| || ||| || | ||| | |||||| || || | || Sbjct 242843 TACTACACCCTCTCGGCGTCCAACGTCCAGTTTAAGTTCCCTCCTCCTGGCATCTTGACC 242784 Query 280053 GGCATCACATCAAAGGATCGCGCAATCAT--GAAGCTCCGTGGCGTCTCCTTTGCTTATC 280110 ||| ||| || || || || || || ||| || |||||| | || || | Sbjct 242783 GGCGTCAAGTCTCAGACCCGAGCCATTATCCGAATGACC--AACGTCTCGTACGCGTACC 242726 Query 280111 CCAATGGCCCCAA--CATCT-TCA--GCAGTGTCAACTCGCAGGTTTCTATGAACTCACG 280165 |||| | || || | ||| ||| | || || || ||| | | || || || Sbjct 242725 CCAACGCGCCGAAGCCGTCTCTCATGGACGTTTC--CTGCCAGCTCACCCTGTCGTCGCG 242668 Query 280166 GATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGG 280225 | | ||||||||||||| |||||||| ||||| || || ||||| |||| || || Sbjct 242667 TGTCGCCATCATTGGACCCAACGGTGCGGGCAAGTCGACGCTCATCAAGCTCCTTACCGG 242608 Query 280226 CGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGT 280285 ||||||| | || || ||| |||||| || ||| |||| || | ||| | Sbjct 242607 CGAGACCATTCCTTCTTCCGGAAAGGTTGAGAAGCACCCTAACCTGCGTATCGGCTACAT 242548 Query 280286 CGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACAT 280345 |||||||| | | ||| | |||| |||||||| | ||| || ||||| ||| | Sbjct 242547 TAAGCAGCACGCGCTGGAGCACGTTGAGATGCACCTGGAGAAGACCCCCAACCAGTACCT 242488 Query 280346 TCAGTGGCGCTATGC 280360 ||||||||||| || Sbjct 242487 GCAGTGGCGCTACGC 242473 >seq42 Length=1784988 Score = 113 bits (124), Expect = 9e-20 Identities = 292/443 (66%), Gaps = 8/443 (2%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 || ||||| || | |||||| |||| ||||| |||||||||||||||||||| | Sbjct 877679 TCAAAGAAGTTGGTCTTGCCACCCAGCGAGATGTTTTCCATGAAGTCGAAGGGGTTCGAC 877620 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 | |||||| ||| | ||| || || |||| | |||||| || || ||||| | Sbjct 877619 GACTTGTACACCTTCTCGTTGCCGAGGGCCACGAGCAGGCGGTCGGCGACGAACTCGATG 877560 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| ||||| | | ||||||||| | || || || | |||||| | Sbjct 877559 TACTGCTTCATCAAATTGGCGTTCATGCCGAGCAGCGCGCACGGCAGGGCCTCAGTCAAA 877500 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTGTGC-CAGAGA 251798 || |||| ||| ||| || || ||| | || ||| | |||| | | | | Sbjct 877499 AACTCCTGCTCGATGGTGACAGCATCCGTGATGATGTCCTCGATGACCTTTTTGCTGGCA 877440 Query 251799 CAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTC 251858 | | | || || | |||| |||||| | |||| | ||||||||||||||| Sbjct 877439 CGG----TGCTTCATGTGGGAGTGCAGGAGGCAGGCAAAGTCGGTGTGCAGACCCTCGTC 877384 Query 251859 GCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCA 251918 || ||||| |||||| || | || ||||||||| | ||||| ||| ||||||| Sbjct 877383 TCGCGAGATGAGCTCGTTCGAGAAGGTCAAGCCAGGCATGAGGCCACGCTTCTTGAGCCA 877324 Query 251919 GAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAG 251978 |||||| | ||||| || ||| | | |||||||| | | ||||| || Sbjct 877323 GAAGATGGAAGCAAAGGCACCGCTGAAGAAGATGCCCTCGACGGCGGCGAAGGCAACCAG 877264 Query 251979 GCGCTCAGCAAACGACTTGTCCT 252001 ||||| |||||| ||| ||||| Sbjct 877263 GCGCTGAGCAAAGGACGAGTCCT 877241 >seq4 Length=1694709 Score = 84.2 bits (92), Expect = 4e-11 Identities = 154/223 (69%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 || |||||||| || |||| ||||| ||||| || |||| ||||| || || ||| Sbjct 1426473 GGCGAGGATCTCTGCAACTGCACCTTCTCTCTCGCCTACGGTGCCAAGATCCTCCTCAAC 1426532 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 || | ||| | ||||||| ||| | || || || || ||| ||||| || | Sbjct 1426533 CAGACTCACCTGCGCCTCAAGCGCGGCCAGCGCTACGGCCTTTGCGGCCCCAACGGCTCC 1426592 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || ||| ||||| ||||||||||| |||| ||| | | ||| ||||| | ||| Sbjct 1426593 GGCAAGTCTACTCTGATGCGCGCCATCAACAACGAGCAGGTCG-AGGGTTTCCCCAAGCA 1426651 Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCC 279566 ||||| | ||| || | || ||||||||| |||||||| Sbjct 1426652 GAGCGAGGTCAAGACCGTCTTCGTCGAGCACGACCTCGACTCC 1426694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836220557004