Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tolypocladium_20sp._20Salcha_20MEA- 2_20[genbank_20GCA_5F000750145.2_202015-03-02] 44 sequences; 30,832,988 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq42 176 4e-39 seq26 125 7e-24 seq19 111 2e-19 >seq42 Length=1784988 Score = 176 bits (194), Expect = 4e-39 Identities = 359/524 (69%), Gaps = 27/524 (5%) Strand=Plus/Plus Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGCC 52385 || || ||| ||||||| ||||| | ||||| || |||||| || |||| | | Sbjct 877189 GTCCCTTGCATTCGCAAGAAGGCCGATTGGGCCATTCGATGGATCCAG---GACAAGGAC 877245 Query 52386 ACGC---TGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGC 52442 || | || ||||| |||| ||||||||| ||||||||| | || || ||| Sbjct 877246 TCGTCCTTTGCTCAGCGCCTGGTTGCCTTCGCCGCCGTCGAGGGCATCTTCTTCAGCGGT 877305 Query 52443 AGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGC 52502 |||||| ||||||| | | || | | ||| | ||||| ||| |||| ||| Sbjct 877306 GCCTTTGCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCTTGACCTTCTCG 877365 Query 52503 AACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCT---ACT-- 52557 |||||| | || ||||| ||||| || |||||||| |||||||| |||||| ||| Sbjct 877366 AACGAGCTCATCTCGCGAGACGAGGGTCTGCACACCGACTTTGCCTGCCTCCTGCACTCC 877425 Query 52558 -ACAAGACGCGC-GTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGA 52615 ||| || || | ||| | | |||| | ||| | || ||| ||| ||| Sbjct 877426 CACATGAAGCACCGTGCCAGCAAAAAGGTCATCG---AGGA-------CATCATCACGGA 877475 Query 52616 GGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCAT 52675 || || | ||||| |||||||||| || | || |||||| || |||||| ||||| Sbjct 877476 TGCTGTCACCATCGAGCAGGAGTTTTTGACTGAGGCCCTGCCGTGCGCGCTGCTCGGCAT 877535 Query 52676 GAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCT 52735 |||||| | | ||| ||||||||||||| || || || || ||| | ||| || Sbjct 877536 GAACGCCAATTTGATGAAGCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCGTGGCCCT 877595 Query 52736 CGGGCAGCCA-AAGTACTTCAACGC-TCGCAATCCGTTTGAGTTTATGAACAACATTTCG 52793 | |||| | | ||| | ||| | ||| || || || || || ||| | ||||| ||| Sbjct 877596 C-GGCAACGAGAAGGTGTACAAGTCGTCG-AACCCCTTCGACTTCATGGAAAACATCTCG 877653 Query 52794 CTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 || | |||||||||||||| || |||||||| ||||| || || Sbjct 877654 CTGGGTGGCAAGACCAACTTCTTTGAGAAGCGTGTCGGTGACTA 877697 >seq26 Length=329099 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| |||| || | ||| | | | |||||||| || |||||||||||||| Sbjct 245014 CCACCGCGCAGGCGCAGCACCAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTG 245073 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || |||||| || || || |||| | |||| || ||||| || ||||| || Sbjct 245074 AGGGTCCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGTCGCTGCTGATCCGGGGGG 245133 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 ||||| || ||||| ||| ||| || | | || | ||| ||| |||| |||||| Sbjct 245134 ATACCCTCCTTGTCCTGGATCTTTGACTTGACGTTGTCGATGGTATCGCTCGATTCCACC 245193 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| ||| | ||| || || ||||| || || || || |||||||| Sbjct 245194 TCGAGCGTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCAT 245240 Score = 114 bits (126), Expect = 1e-20 Identities = 144/194 (74%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||||| | ||||| |||||| || || ||||| | | | Sbjct 244821 CTCCTTCTGGATGTTGTAGTCGCTGAGGGTACGGCCGTCCTCCAGCTGCTTACCAGCAAA 244880 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--T 138540 ||| || ||||| || ||||| || || || || ||||| ||| | || | || | | Sbjct 244881 GATAAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTGTC-CTGAATCTTGGACTTGACGT 244939 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 || || | ||||||| |||| |||||||| | ||| | ||| || ||||||| ||| || Sbjct 244940 TG-TCGATGGTGTCGCTCGATTCCACCTCCAGCGTGATCGTCTTGCCAGTCAAAGTCTTG 244998 Query 138601 ACAAAAATCTGCAT 138614 || || || ||||| Sbjct 244999 ACGAAGATTTGCAT 245012 >seq19 Length=692283 Score = 111 bits (122), Expect = 2e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||||||| || || |||||||| || || |||| | Sbjct 74204 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 74263 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541 ||| || ||||| |||||||| || || || || ||||| ||| || || | ||| Sbjct 74264 GATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATT 74323 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 | || | |||||||| ||||||||||| | || | ||| || || || || || || | Sbjct 74324 G-TCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGA 74382 Query 138602 CAAAAATCTGCAT 138614 | ||||||||||| Sbjct 74383 CGAAAATCTGCAT 74395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262127055680