Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tolypocladium_20sp._20Salcha_20MEA- 2_20[genbank_20GCA_5F000750145.2_202015-03-02] 44 sequences; 30,832,988 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq26 116 4e-21 seq19 116 4e-21 seq2 107 2e-18 >seq26 Length=329099 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | |||| ||||| ||| | |||||||| || || || ||||| |||| Sbjct 245014 CCACCGCGCAGGCGCAGCACCAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTG 245073 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || || || ||||| || || || |||| | |||||||||||| || || Sbjct 245074 AGGGTCCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGTCGCTGCTGATCCGGGGGG 245133 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| ||| || ||||| |||| |||| ||| || | || || Sbjct 245134 ATACCCTCCTTGTCCTGGATCTTTGACTTGACGTTG-TCGATGGTATCGCTCGATTCCAC 245192 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | ||| ||||| ||||| || || || || |||||||| Sbjct 245193 CTCGAGCGTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCAT 245240 Score = 105 bits (116), Expect = 6e-18 Identities = 135/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 126916 CGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCC 126975 ||| ||||| || || || ||||| ||| | ||||| ||| || ||||| ||||| Sbjct 245271 CGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCC 245330 Query 126976 AGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT 127035 ||| |||||| |||||||||||||| || ||||||||||||||| || || ||| Sbjct 245331 GGCGAAGATCAGGCGCTGCTGATCGGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTT 245390 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | | |||| |||||| | | ||| || |||| ||| | || |||||||| || || Sbjct 245391 CACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCGGTGAGGGT 245450 Query 127096 TTTTAC 127101 || || Sbjct 245451 CTTGAC 245456 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || |||||||| ||| | ||||| ||| || ||||| ||||| Sbjct 245565 GTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTTCCG 245624 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||||| |||||||| ||||| || ||||||||||||||| || || ||| Sbjct 245625 GCGAAGATCAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTC 245684 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGT 127089 | | |||| |||||| | |||||| || | || | || ||||| || Sbjct 245685 ACATTGTCGATGGTGTCGGACGACTCGACCTCAAGAGTGATGGTCTTGCCCGT 245737 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || || || ||||| |||| | || || || || ||||| || ||||| | Sbjct 244821 CTCCTTCTGGATGTTGTAGTCGCTGAGGGTACGGCCGTCCTCCAGCTGCTTACCAGCAAA 244880 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTT 127040 ||| | ||||||||||| || || ||||||||||||||| || || ||||| ||| Sbjct 244881 GATAAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTT 244940 Query 127041 GTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 127100 | |||| |||||| | || || || | || | ||| ||||| |||| ||| || | Sbjct 244941 G-TCGATGGTGTCGCTCGATTCCACCTCCAGCGTGATCGTCTTGCCAGTCAAAGTCTTGA 244999 Query 127101 CAAAAATCTGCAT 127113 | || || ||||| Sbjct 245000 CGAAGATTTGCAT 245012 >seq19 Length=692283 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| ||||| || | || ||| || || || ||||| |||| | Sbjct 74169 CCACCACGGAGGCGCAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 74228 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || ||||| || || ||| |||||| |||||||| || || || Sbjct 74229 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGG 74288 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| ||| || ||||| | |||| |||||| | | ||| || Sbjct 74289 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACC 74348 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | ||| || || || || || || || ||||||||||| Sbjct 74349 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 74395 >seq2 Length=2502268 Score = 107 bits (118), Expect = 2e-18 Identities = 137/188 (73%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || || ||||| ||| || || || ||| || ||||| || || ||| ||||| Sbjct 2444021 TTCTGGATGTTGTAGTCGGACAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 2443962 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045 |||||||||||||| || || ||||||||||||||| ||| || ||||| | ||| Sbjct 2443961 AATCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 2443902 Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 127105 | ||||||| |||||| || | ||| | || ||||| ||||| || || || ||| Sbjct 2443901 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAA 2443842 Query 127106 ATCTGCAT 127113 |||||| Sbjct 2443841 --CTGCAT 2443836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500538474560