Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tolypocladium_20sp._20Salcha_20MEA-
2_20[genbank_20GCA_5F000750145.2_202015-03-02] 44 sequences; 30,832,988 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq42 111 5e-19
seq10 86.0 2e-11
seq3 86.0 2e-11
>seq42
Length=1784988
Score = 111 bits (122), Expect = 5e-19
Identities = 158/220 (72%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 133439 CCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGT 133498
||||| ||| ||||| | || ||||| ||| |||||||||||||||| ||
Sbjct 877192 CCTTGCATTCGCAAGAAGGCCGATTGGGCCATTCGATGGATCCAGGACAAGGACTCGTCC 877251
Query 133499 TTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTC 133558
|||||| || || ||||| || || | || |||||||| || ||||| ||||| ||
Sbjct 877252 TTTGCTCAGCGCCTGGTTGCCTTCGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCCTT- 877310
Query 133559 TGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGA 133617
||| || || || ||||| || |||||||| | | ||||| || || || |||||
Sbjct 877311 TGCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCTTGACCTTCTCGAACGA 877370
Query 133618 ACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC 133657
|| || || | ||||||| || |||||||| ||||||
Sbjct 877371 GCTCATCTCGCGAGACGAGGGTCTGCACACCGACTTTGCC 877410
>seq10
Length=1034604
Score = 86.0 bits (94), Expect = 2e-11
Identities = 104/141 (74%), Gaps = 3/141 (2%)
Strand=Plus/Plus
Query 301812 CAGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGC 301871
||||||||| | | || || ||||| |||| ||||| |||||||| ||||||||
Sbjct 270328 CAGAATTTCCTTGAGTCGCGGCACACCGAGGGTGACGTT---CTTGGACGAGACACCAGC 270384
Query 301872 AAAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAAT 301931
||| ||||| || || || || | ||| || | |||||||||||| || ||||| |
Sbjct 270385 AAAATGGAAGGTGTTGAGCGTCATTTGCGTCGCAGGCTCACCAATAGACTGCGCCGCCAA 270444
Query 301932 CATACCAACCATTTCTCCTGG 301952
| ||||||||| || || ||
Sbjct 270445 AACACCAACCATCTCACCAGG 270465
>seq3
Length=2036465
Score = 86.0 bits (94), Expect = 2e-11
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689
|||||| | |||||| ||||||||| || || ||||||||| | |||||||||||
Sbjct 914934 GTATTCGATGATCTCAGTGCACAGGTTGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTT 914993
Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749
|| | ||| || ||||||||||| || ||| | ||| | || |||||| |||| ||
Sbjct 914994 GCTCTTTCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTGCCAGTCTCCGTCTGGGC 915053
Query 155750 GTCCA 155754
||||
Sbjct 915054 TTCCA 915058
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471816770262828
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |