Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tolypocladium_20sp._20Salcha_20MEA- 2_20[genbank_20GCA_5F000750145.2_202015-03-02] 44 sequences; 30,832,988 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq42 111 5e-19 seq10 86.0 2e-11 seq3 86.0 2e-11 >seq42 Length=1784988 Score = 111 bits (122), Expect = 5e-19 Identities = 158/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 133439 CCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGT 133498 ||||| ||| ||||| | || ||||| ||| |||||||||||||||| || Sbjct 877192 CCTTGCATTCGCAAGAAGGCCGATTGGGCCATTCGATGGATCCAGGACAAGGACTCGTCC 877251 Query 133499 TTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTC 133558 |||||| || || ||||| || || | || |||||||| || ||||| ||||| || Sbjct 877252 TTTGCTCAGCGCCTGGTTGCCTTCGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCCTT- 877310 Query 133559 TGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGA 133617 ||| || || || ||||| || |||||||| | | ||||| || || || ||||| Sbjct 877311 TGCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCTTGACCTTCTCGAACGA 877370 Query 133618 ACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC 133657 || || || | ||||||| || |||||||| |||||| Sbjct 877371 GCTCATCTCGCGAGACGAGGGTCTGCACACCGACTTTGCC 877410 >seq10 Length=1034604 Score = 86.0 bits (94), Expect = 2e-11 Identities = 104/141 (74%), Gaps = 3/141 (2%) Strand=Plus/Plus Query 301812 CAGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGC 301871 ||||||||| | | || || ||||| |||| ||||| |||||||| |||||||| Sbjct 270328 CAGAATTTCCTTGAGTCGCGGCACACCGAGGGTGACGTT---CTTGGACGAGACACCAGC 270384 Query 301872 AAAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAAT 301931 ||| ||||| || || || || | ||| || | |||||||||||| || ||||| | Sbjct 270385 AAAATGGAAGGTGTTGAGCGTCATTTGCGTCGCAGGCTCACCAATAGACTGCGCCGCCAA 270444 Query 301932 CATACCAACCATTTCTCCTGG 301952 | ||||||||| || || || Sbjct 270445 AACACCAACCATCTCACCAGG 270465 >seq3 Length=2036465 Score = 86.0 bits (94), Expect = 2e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 |||||| | |||||| ||||||||| || || ||||||||| | ||||||||||| Sbjct 914934 GTATTCGATGATCTCAGTGCACAGGTTGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTT 914993 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749 || | ||| || ||||||||||| || ||| | ||| | || |||||| |||| || Sbjct 914994 GCTCTTTCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTGCCAGTCTCCGTCTGGGC 915053 Query 155750 GTCCA 155754 |||| Sbjct 915054 TTCCA 915058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816770262828