Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tolypocladium_20sp._20Salcha_20MEA- 2_20[genbank_20GCA_5F000750145.2_202015-03-02] 44 sequences; 30,832,988 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq42 116 4e-21 seq26 105 6e-18 >seq42 Length=1784988 Score = 116 bits (128), Expect = 4e-21 Identities = 344/521 (66%), Gaps = 21/521 (4%) Strand=Plus/Plus Query 46758 GTGCCATGCGTTCGCAAAAAGGCCCAGTGGGCCATGAAGTGGATCGAGAGCGAGACCGCC 46817 || || ||| ||||||| |||||| | |||||||| |||||| || | || | | Sbjct 877189 GTCCCTTGCATTCGCAAGAAGGCCGATTGGGCCATTCGATGGATCCAGGACAAGGACTCG 877248 Query 46818 ACGCTGGCCGAGCGCATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGT 46877 | | || ||||| |||| || ||||| ||||| ||| | || || || Sbjct 877249 TCCTTTGCTCAGCGCCTGGTTGCCTTCGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCC 877308 Query 46878 TTTGCCGCCATTTTTTACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAAC 46937 ||||| |||| || | | || | ||| | ||||| ||| |||| ||| ||| Sbjct 877309 TTTGCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCTTGACCTTCTCGAAC 877368 Query 46938 GAGTTGATCTCGCGCGACGAAGGACTACACACGGACTTTGCGTGTCTCT---ATT---AC 46991 ||| | |||||||| ||||| || || ||||| |||||||| || ||| | | || Sbjct 877369 GAGCTCATCTCGCGAGACGAGGGTCTGCACACCGACTTTGCCTGCCTCCTGCACTCCCAC 877428 Query 46992 AAGACGCGC-GTGAATGAGAAATTAAACTCGGACACGATCCTGAGCATGTTTAGGGAGGC 47050 | || || | ||| || || ||| || || || | ||| | | ||| || Sbjct 877429 ATGAAGCACCGTGCC--AGCAA--AAA---GGTCA---TCGAGGACATCATCACGGATGC 877478 Query 47051 GGTGAGCATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAA 47110 || | |||||| |||||||||| |||| ||| ||||| ||| |||| |||||||| Sbjct 877479 TGTCACCATCGAGCAGGAGTTTTTGACTGAGGCCCTGCCGTGCGCGCTGCTCGGCATGAA 877538 Query 47111 CGCACAGTCTATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGG 47170 ||| | | ||| | || || ||||| || || || || ||| | ||| ||||| Sbjct 877539 CGCCAATTTGATGAAGCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCGTGGCCCTCGG 877598 Query 47171 ACAACCGAAATATTTTAATGCTCGT--AATCCGTTTGAGTTTATGAACAACATTTCGCTC 47228 ||| ||| | | || |||| || || || || || ||| | ||||| ||||| Sbjct 877599 -CAA-CGAGAAGGTGTACAAGTCGTCGAACCCCTTCGACTTCATGGAAAACATCTCGCTG 877656 Query 47229 GAGGGCAAAACCAATTTTTTCGAGAAACGAGTCGGAGAGTA 47269 | ||||| ||||| || || ||||| || ||||| || || Sbjct 877657 GGTGGCAAGACCAACTTCTTTGAGAAGCGTGTCGGTGACTA 877697 >seq26 Length=329099 Score = 105 bits (116), Expect = 6e-18 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962 |||| ||||| |||| ||| | | | ||||| || || |||||||||||||| | ||| Sbjct 245020 CGCAGGCGCAGCACCAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTC 245079 Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022 || || || ||||| || |||| | |||| || ||||| ||||| || || || || Sbjct 245080 CGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGTCGCTGCTGATCCGGGGGGATACCC 245139 Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082 || || || || ||| || | | || | |||||| ||| ||||| |||| | Sbjct 245140 TCCTTGTCCTGGATCTTTGACTTGACGTTGTCGATGGTATCGCTCGATTCCACCTCGAGC 245199 Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | ||| || || ||||| || || | ||| |||||||| Sbjct 245200 GTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCAT 245240 Score = 89.7 bits (98), Expect = 5e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 131932 CTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATA 131991 ||| || || |||||||||||||| | |||||| || || ||||| ||||| | | | Sbjct 244821 CTCCTTCTGGATGTTGTAGTCGCTGAGGGTACGGCCGTCCTCCAGCTGCTTACCAGCAAA 244880 Query 131992 GATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTG 132051 ||| || ||||| ||||| || || ||||| || || || ||| || || | | Sbjct 244881 GATAAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTT 244940 Query 132052 TTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAT 132111 || | || ||| ||| ||||| || | ||| | ||| || ||||||| ||| || | Sbjct 244941 GTCGATGGTGTCGCTCGATTCCACCTCCAGCGTGATCGTCTTGCCAGTCAAAGTCTTGAC 245000 Query 132112 GAAAATCTGCAT 132123 ||| || ||||| Sbjct 245001 GAAGATTTGCAT 245012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610937863840