Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tolypocladium_20sp._20Salcha_20MEA- 2_20[genbank_20GCA_5F000750145.2_202015-03-02] 44 sequences; 30,832,988 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq3 219 5e-52 seq16 82.4 1e-10 >seq3 Length=2036465 Score = 219 bits (242), Expect = 5e-52 Identities = 1018/1588 (64%), Gaps = 51/1588 (3%) Strand=Plus/Plus Query 110524 AATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTG 110583 ||| ||||| || || || ||| ||||| || | ||||| | | ||| ||||| Sbjct 914178 AATCTCCCAGACGGTCTTGTACAGAGCTTTGATGTCGGCAGGGATGTTGGGGATGTTCTG 914237 Query 110584 GATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTT 110643 ||| ||||| | | | ||| | | ||||||| | | |||||| ||||| || | Sbjct 914238 GATCGAACCGTTCTCGGAAATGATGCGGTTCTTCATAGCATCGGACCACAGACCCATATC 914297 Query 110644 CTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCT 110703 |||||| |||| || ||| || | ||||| || |||||| || || Sbjct 914298 AACGAGGTCCTTGAGCAGCCATGGGTTAACGACCTGGAACTCGCCAGCGAGGACTCGTCG 914357 Query 110704 CAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGT 110763 |||||||||| | ||||| || || ||||| || || || ||||| || || | || Sbjct 914358 TTGGTAGATGTTGGAAGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAAAATCTGAGACGT 914417 Query 110764 GGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCG 110823 | || || ||||| || || | | | ||||| |||| || | |||||||| | Sbjct 914418 GCTAGCAGTGGGCATGGGAGCAAGGAGCAAGCTGTTGCGAATGCCATGCTCCTTGACCTG 914477 Query 110824 TTCCTTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATGTCAAAC 110881 ||||||||| ||||| || | | | || || || || |||| ||||||| ||| Sbjct 914478 CTCCTTGAGAGTCTCCCACTCCCACAGATCAGAG-GGCTTGACATTCC-ACATGTCGAAC 914535 Query 110882 TGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCA 110941 ||||| | || | |||||||| || |||| || || || | ||| | | | Sbjct 914536 TGAAGGATACCCTCCGACGCGGGTGATCCCTTGAACGTCGAGTAAGGACCCTCCTCCTTG 914595 Query 110942 GCCAATTC-ACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATT 111000 |||| | || | || ||||| ||||| || ||||| |||||||| | || Sbjct 914596 GCCAGCTGTACCGAG-GCGGTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCTGCTGGTT 914654 Query 111001 CATCTCCTTGGCTTCATCTGAATC-AAATGCGTAGCGGCACAA-AATAAATACATCCGCG 111058 || | ||||| || || ||| || | ||| || | || || |||| || Sbjct 914655 CAATTGTCGAGCTTCGGGAGACTCGAAAGGCAT-GCG-CAGAGCAAGGAAGGCATCAGCC 914712 Query 111059 AGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA 111118 ||||| || ||||||| |||||| |||| ||| ||||| || || ||||| | | Sbjct 914713 AGACCCTGGACACCCACACCAATGGGTCGGTGGCGCATGTTGCTGTTGCGCGCCTCCGGA 914772 Query 111119 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT 111178 || || || | || ||| |||| ||| || || ||| | || |||| | Sbjct 914773 ACAGGGTAGTAGTTGACGTCGATGATCTTGTTGAGGTTGCGAACAACGACCTGGGTGACT 914832 Query 111179 TCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTG------ACATACTTTGGA 111232 || || || || | | || | || | |||| ||| ||| | || Sbjct 914833 TCGTGCAGCTTCTTGAAGTCGTA---GCA---CCCTTCGTTGTAGTCAACAAAGGCGGGC 914886 Query 111233 AGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATT 111292 || || | ||||||| ||||| || ||| ||| || | | | ||| || | || Sbjct 914887 AGAGCCAACGATGCCAGGTTGCACACGGCCACCTCGTCGGGAGCAGAGTATTCGATGATC 914946 Query 111293 TCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTG 111352 || || || | |||||| || || || |||| ||||| ||||| ||||| |||| Sbjct 914947 TCAGTGCACAGGTTGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTTCGGTTG 915006 Query 111353 CACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCC 111412 || |||||||||||||||||| |||| | || ||||||||||| | || | || | Sbjct 915007 CAGGCATCCTTGTAGAGCATGAAGGGGTTGCCAGTCTCCGTCTGGGCTTCCAAGATGGAG 915066 Query 111413 TTCCA-AACATCGGCGGCTGGTACAATGG-CGTTGGCCCGT--CCCTCCGCCTCGTACTT 111468 | ||| | | || ||| | || |||| | | | || | |||| ||| ||||| Sbjct 915067 TACCACAGCTTCTGCGCCCGG----ATGGTCTTACGACCTTTGCCCTGTTGCTCATACTT 915122 Query 111469 TGTGTAGAGGGCTTCAAACTCCTCACCCACCGC-GTCGGAGAGACCTGGTGCCTT-GTCT 111526 | ||| || || || ||||| || ||| || || | || || || || || || Sbjct 915123 TTCGTACAGAGCCTCGAACTCATC-GCCATAGCAATCAGCCAGGCC-GGGGCATTCGTTG 915180 Query 111527 GGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATC 111586 || || | || | ||| | ||| | ||| || ||||||||||| || || || ||| Sbjct 915181 GGGCACATGAGGGTCCAGTCGCCATTCTTCTCGACACGCTTCATGAAGAGATCGGGGATC 915240 Query 111587 CACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAAC 111646 ||||||| || || || | | |||||||| || | || ||||| || | Sbjct 915241 CACAGGGCAAGGAACAGGTCACGAGCACGAGCCTCCTCCTTGCCGTGGTTCTTCCGCAGA 915300 Query 111647 TCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATA------GAT 111700 || |||||||| | || || |||||||| ||||| || |||| |||| | | | Sbjct 915301 TCGAGGAACTCGAAGACGTCGGCGTGCCACGGCTCCAGGTAGATGGCGAAAGCGCCGGGT 915360 Query 111701 CCCTT-TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCAT 111759 | ||| | | ||||| || | || || | || ||| ||| || || |||||||| Sbjct 915361 CGCTTGTTGCCGCCC----TGGTCGACGTATCTGGCCGTGTTGTTGAACACCCGAAGCAT 915416 Query 111760 TGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCAC 111819 || | | || | || || || || || ||| ||| | |||| | | Sbjct 915417 GGGGGTGACGCCGTTGGAAGTGCCGTTGGTGCCAGCAATGTAGGATCCAGTGGCGCGGAT 915476 Query 111820 ATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAG 111879 | || | || || || || || |||||| ||| ||||| ||||| | | || Sbjct 915477 ACGGTGAACGTTCAGGCCGATGCCACCAGCCATCTTGGAGATCATGGCACAAGTCTTGAG 915536 Query 111880 AGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACAT 111939 || | |||||||| | || ||||||||| | ||| |||||||||| ||||| Sbjct 915537 GGTGTCGTAGATACCCTCAATGCTGTCCTCCTTCATATCGACAAGGAAGCAAGAGGACAG 915596 Query 111940 CTGCGGTCT-TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT 111998 ||| || || || || || |||||||| || || || | ||||| ||| | | ||| Sbjct 915597 CTG-GGCCTGGGGGGTGCCCGCATTGAACAGCGTGGGCGAGGCGTGGGTGA--AGAACTT 915653 Query 111999 G--GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGAT 112056 | |||||| || ||| ||||| | ||| ||||||| || || |||||||| Sbjct 915654 GCTGGACATGAGGTTGTACGTCTCGATGACGCGCTCAATGTTGTCTCCCCAGATGCCGAC 915713 Query 112057 TGCGACCCGCATGAACATGTACTGTGGG 112084 ||||| ||||||| ||||| |||||| Sbjct 915714 GGCGACACGCATGATCATGTGTTGTGGG 915741 >seq16 Length=717971 Score = 82.4 bits (90), Expect = 1e-10 Identities = 234/351 (67%), Gaps = 14/351 (4%) Strand=Plus/Minus Query 11540 AAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGC 11599 ||||| |||||||| ||||| | || |||| || |||| ||| || || | Sbjct 199581 AAGCCGTCCATCTCCGTGAGAATCTGGTTAAGCGTGGCCTCTCGCTCGTCGTTGCCACCG 199522 Query 11600 ATACCACCAGCACTGCGTTG-CTTGCCC-ACCG----CATCAATCTCATCAATGAAGACA 11653 | |||| ||||| || || |||| |||| | || || || || ||||||| Sbjct 199521 AATCCACGGCCACTGTCCTGTCTGGCCCTACCGATGGCGTCGATTTCGTCGATGAAGATG 199462 Query 11654 ATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACA 11713 || || || ||| | |||| | |||| ||||| || || | | || ||| Sbjct 199461 ATGCACGGCGCATTCTTGCGGCCCTCGGCAAACAGATCACGGACTCGAGACGGTCCAACA 199402 Query 11714 CCAACAAACATCTCCACAAAGTTTGCGGCAGAG-CACTGGATGAATGGGACATTTGATTC 11772 || |||||||| |||||||| | | | || | ||||| | ||| || ||| || || Sbjct 199401 CCGACAAACATTTCCACAAACTCGGAGCCACTGACACTGAA-GAACGGCACACCCGACTC 199343 Query 11773 ACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGC 11832 || || | || ||| || || ||||| ||||| || || || ||||||| ||| Sbjct 199342 TCCAGCTGTTGCCTTGGCAAGAAGCGTCTTGCCCGTTCCCGGTGGGCCGGCGAGAATGGC 199283 Query 11833 GCCTCGGGGGATCTTGGCACC--ACTTC-CAAAATATCTCTCGGGTTGCTT 11880 ||| ||||| ||||||||||| |||| | || | ||||||||||||| Sbjct 199282 GCCACGGGGAATCTTGGCACCGAGCTTCTCGAACT---TCTCGGGTTGCTT 199235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031654582400