Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tolypocladium_20sp._20Salcha_20MEA- 2_20[genbank_20GCA_5F000750145.2_202015-03-02] 44 sequences; 30,832,988 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq26 111 5e-19 seq3 105 2e-17 seq10 89.7 2e-12 >seq26 Length=329099 Score = 111 bits (122), Expect = 5e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || ||||| || || || ||||| || || || || || || Sbjct 245238 CATACCACCACGGAGACGAAGGACAAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTC 245297 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| || || || ||||| || ||||| || || |||||||| || Sbjct 245298 GGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGATCGGG 245357 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| || || || |||||||| || | || ||||| || || | || || | || Sbjct 245358 GGGAATGCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCGATGGTGTCGGAAGACTC 245417 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 || || || || | ||||| ||||| || || || || Sbjct 245418 CACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 245456 >seq3 Length=2036465 Score = 105 bits (116), Expect = 2e-17 Identities = 218/323 (67%), Gaps = 1/323 (0%) Strand=Plus/Plus Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 ||||| | || || || ||||| || || || ||||||| || || || || || Sbjct 1720441 GCTGTCGTCACGGTCCCGGCCTACTTCAACGACTCCCAGCGCCAGGCCACCAAGGACGCC 1720500 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || |||||| || | || || || |||| || || || ||||| || || || ||| Sbjct 1720501 GGTCTCATTGCCGGCCTCAACGTGCTCCGAATCATCAACGAGCCCACCGCCGCTGCCATT 1720560 Query 349730 GCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGT 349789 || || || ||||| || | | || || || | || || || ||| | ||| Sbjct 1720561 GCCTACGGCCTTGACAAGAAGGTCGAGGGCGAGCGCAACGTCCTGATCTTCGATCTTGGT 1720620 Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849 |||||||| || ||||| || || || || | || ||||| || || || || || | Sbjct 1720621 GGTGGTACCTTCGATGTCTCTCTCCTCACCATCGAGGAGGGTATCTTCGAGGTCAAGTCC 1720680 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909 || |||||||| || || | ||||| || || || || || || || ||| || || Sbjct 1720681 ACCGCTGGTGACACCCACTTGGGTGGTGAGGACTTCGACAACCGCCTGGTTAACCACTTC 1720740 Query 349910 GTTAAAGAATTTAAGCGTCAAGC 349932 ||||| ||||| || || ||||| Sbjct 1720741 GTTAACGAATTCAAACG-CAAGC 1720762 >seq10 Length=1034604 Score = 89.7 bits (98), Expect = 2e-12 Identities = 100/133 (75%), Gaps = 3/133 (2%) Strand=Plus/Plus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 || |||||||| | || || ||| || || | ||||||||||| ||||| || || Sbjct 270344 CGCGGCACACCGAGGGTGACGTTC---TTGGACGAGACACCAGCAAAATGGAAGGTGTTG 270400 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 || || | ||| || | ||||||||||| |||||||| || | ||| |||||||| || Sbjct 270401 AGCGTCATTTGCGTCGCAGGCTCACCAATAGACTGCGCCGCCAAAACACCAACCATCTCA 270460 Query 377578 CCAGGATTGACAA 377590 ||||| |||||| Sbjct 270461 CCAGGGCTGACAA 270473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515253545775332