Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tolypocladium_20sp._20Salcha_20MEA-
2_20[genbank_20GCA_5F000750145.2_202015-03-02] 44 sequences; 30,832,988 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq11 109 4e-19
seq5 96.9 3e-15
>seq11
Length=970842
Score = 109 bits (120), Expect = 4e-19
Identities = 272/405 (67%), Gaps = 20/405 (5%)
Strand=Plus/Plus
Query 30062 ACGTAAAACTG---ACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTG 30118
||||||||||| | ||||| ||||| || || || |||||| || ||| ||
Sbjct 259193 ACGTAAAACTGGGCAAACATG---TGGCAAGGCGGCAGGGCCATGCTCGTCAGGTCCTTC 259249
Query 30119 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTCC 30175
|||||||| || ||| ||| || || | ||| | || || ||| | || | |
Sbjct 259250 GGGTTCCACGCAGACATGATTATACGGCGGTCGTAGGGCTTCGTCCGCAGCTTGTGTATC 259309
Query 30176 ACGGCGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTA 30234
||| || || ||||| || || ||| |||| |||||||| | || ||| |||
Sbjct 259310 ACGTCG----GCGAGCTGGTCGACGCCCTGGCCCGTGTAGTCTGTCTTCGCATCCACGTA 259365
Query 30235 CTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT 30294
| | || || || |||| ||||||||||||||| || || |||| || || |||| |
Sbjct 259366 CGCGGCGCCAAAGTGCCGCCACTGGAACCCGTAGACGGGCCCCAAATCGCCAACTTCTCG 259425
Query 30295 GTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTAC 30354
|||| | ||| ||| | || || | || |||||| ||||||| ||||| ||
Sbjct 259426 GTGCGACAGGCCGACGCCGTCGAGGAACTCGCGCGACCCGTTGCCGTCCCAAATCTTGAC 259485
Query 30355 CCC--CTTCTCAGAGAGC-TCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTC 30411
|| | || | || || | ||| | ||| |||| || |||||||||||||||
Sbjct 259486 GCCGGCCTCGCTCAGCGCGAGTGAGGACGTGTTGG--CCTC-GATGAACCACAGCAGCTC 259542
Query 30412 CTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456
| |||||||| ||| ||||| | ||| || || ||||| ||
Sbjct 259543 GGCGACGACGGCTTTCAGGAAGACGCGCTTCGTGGTCAGGAGTGG 259587
Score = 104 bits (114), Expect = 2e-17
Identities = 154/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 29828 ATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACG 29887
|||| ||| ||||||| | ||||| | ||| || || ||| |||| || |||
Sbjct 258878 ATCCCCAGCTCGGGAAAGTCCCGTGGCTCGCGCTCCAGTTGCTCCTTGAGCGCATCAACG 258937
Query 29888 TTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTG-GACAAACTCTCCCGGTTCTAGCCC 29946
| || || |||||||| |||||||||| | ||| | || || || || | ||| |
Sbjct 258938 TGGTCGAGATAGACGTGGGCGTCTCCCATGACGTGCGTCAGGCTG-CCGGGCACCAGCTC 258996
Query 29947 GGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCC 30006
| || || || | ||||| ||| || | | ||||||||| ||||| || || || ||
Sbjct 258997 GCACACATGGGCAAGCATGTGCGTCAGCAACGCGTAGCTGGCAATGTTGAACGGGACGCC 259056
Query 30007 GAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 30042
||| |||||||| | ||||||||||| ||||||||
Sbjct 259057 GAGGCCCATGTCGCAGGACCTCTGGTATAGCTGACA 259092
>seq5
Length=1590114
Score = 96.9 bits (106), Expect = 3e-15
Identities = 132/180 (73%), Gaps = 6/180 (3%)
Strand=Plus/Minus
Query 52730 CGTCAAGGTGAGGCTGAGGGCCCCCAGGCACCCAGAGATGGGCGACAAGTTTGCGTCGT- 52788
|||||||||| || || | || ||| | ||| |||| || ||||||||||||||
Sbjct 14019 CGTCAAGGTGCGGGTGCGAACCACCAAGATCCCCCAGATCGGAGACAAGTTTGCGTCTCG 13960
Query 52789 TCACGGCGCAAAAGGGGACGTGCGGAGC--CGTCCTGACCCAGGAGGACATGCCCTTCGA 52846
|||||| |||||||| || ||| | ||| | ||| | ||||||||||| ||
Sbjct 13959 TCACGGT-CAAAAGGGCACCATCGGCGTGACGTACCGAC--AAGAGGACATGCCGTTTAC 13903
Query 52847 CAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGATGAC 52906
| ||| || ||| ||||||| ||||||||||||||||||| |||| || | |||||
Sbjct 13902 GAGGGAGGGCGTGACGCCCGACATCATCATCAACCCCCACGCTATTCCGTCGCGAATGAC 13843
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406310182116048
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |